Functional clusters

Information

  • Type InterPro
  • Description RidA family

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00037 5 CH_atr_474 2 2 0.000238322
Brassica napus A01 5 CH_bna_1302 2 2 0.000389795
Citrullus lanatus CG_Chr10 5 CH_cla_199 2 2 0.0000887115
Cucumis sativus L. chr3 5 CH_csa_330 2 2 0.0000834759
Durio zibethinus NW_019167937.1 5 CH_dzi_239 3 8 0.000000721671
Hydrangea macrophylla Hma1.2p1_0673F.1 5 CH_hma_288 2 2 0.000111086
Quercus lobata 8 5 CH_qlo_1220 2 2 0.0000516289
Amborella trichopoda AmTr_v1.0_scaffold00037 6 CH_atr_474 2 2 0.000238322
Brassica napus A01 6 CH_bna_1302 2 2 0.000389795
Citrullus lanatus CG_Chr10 6 CH_cla_199 2 2 0.0000887115
Cucumis sativus L. chr3 6 CH_csa_330 2 2 0.0000834759
Durio zibethinus NW_019167937.1 6 CH_dzi_239 3 8 0.000000721671
Hydrangea macrophylla Hma1.2p1_0673F.1 6 CH_hma_288 2 2 0.000111086
Quercus lobata 8 6 CH_qlo_1220 2 2 0.0000516289

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001