Functional clusters
Information
- Type InterPro
- Description Pollen allergen Ole e 1 family
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr2 | 5 | CH_acertr_19 | 9 | 25 | 3.88236e-22 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 5 | CH_arhy_573 | 3 | 3 | 0.000000489389 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.07 | 5 | CH_arhy_574 | 3 | 3 | 0.000000489389 |
| Brassica napus | C09 | 5 | CH_bna_1040 | 3 | 7 | 0.0000812404 |
| Daucus carota | DCARv2_Chr2 | 5 | CH_dca_680 | 2 | 2 | 0.000637775 |
| Fragaria vesca | Fvb3 | 5 | CH_fve_361 | 3 | 4 | 0.000000416421 |
| Gossypium hirsutum | A04 | 5 | CH_ghi_135 | 6 | 6 | 1.15071e-16 |
| Gossypium hirsutum | D05 | 5 | CH_ghi_54 | 9 | 9 | 2.53082e-27 |
| Helianthus annuus | HanXRQChr15 | 5 | CH_han_1181 | 2 | 2 | 0.0008115 |
| Magnolia biondii | Chr05 | 5 | CH_mbi_1137 | 2 | 2 | 0.000485661 |
| Medicago truncatula | chr2 | 5 | CH_mtr_814 | 3 | 9 | 0.00000744094 |
| Olea europaea | chr12 | 5 | CH_oeu_2 | 11 | 15 | 7.0493e-30 |
| Olea europaea | scaffold1358 | 5 | CH_oeu_270 | 3 | 4 | 0.0000263176 |
| Prunus persica | Pp05 | 5 | CH_ppe_187 | 5 | 11 | 0.0000000000270126 |
| Papaver somniferum | NW_020618823.1 | 5 | CH_pso_296 | 4 | 5 | 0.000000000664773 |
| Papaver somniferum | NC_039363.1 | 5 | CH_pso_297 | 4 | 5 | 0.000000000664773 |
| Rhododendron simsii | chr04 | 5 | CH_rsi_173 | 5 | 8 | 0.000000000000407793 |
| Salix brachista | GWHAAZH00000016 | 5 | CH_sbr_255 | 3 | 3 | 0.000000119127 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 5 | CH_tpr_682 | 2 | 2 | 0.000454184 |
| Vigna mungo | CM024075.1 | 5 | CH_vmu_633 | 2 | 2 | 0.000969211 |
| Acer truncatum | chr2 | 6 | CH_acertr_19 | 9 | 25 | 3.88236e-22 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 6 | CH_arhy_573 | 3 | 3 | 0.000000489389 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.07 | 6 | CH_arhy_574 | 3 | 3 | 0.000000489389 |
| Brassica napus | C09 | 6 | CH_bna_1040 | 3 | 7 | 0.0000812404 |
| Daucus carota | DCARv2_Chr2 | 6 | CH_dca_680 | 2 | 2 | 0.000637775 |
| Fragaria x ananassa | Fvb3-1 | 6 | CH_fan_470 | 3 | 4 | 0.00000167614 |
| Fragaria x ananassa | Fvb3-4 | 6 | CH_fan_549 | 3 | 5 | 0.00000418987 |
| Fragaria vesca | Fvb3 | 6 | CH_fve_361 | 3 | 4 | 0.000000416421 |
| Gossypium hirsutum | A04 | 6 | CH_ghi_135 | 6 | 6 | 1.15071e-16 |
| Gossypium hirsutum | D05 | 6 | CH_ghi_54 | 9 | 9 | 2.53082e-27 |
| Helianthus annuus | HanXRQChr15 | 6 | CH_han_1181 | 2 | 2 | 0.0008115 |
| Magnolia biondii | Chr05 | 6 | CH_mbi_1137 | 2 | 2 | 0.000485661 |
| Medicago truncatula | chr2 | 6 | CH_mtr_814 | 3 | 9 | 0.00000744094 |
| Olea europaea | chr12 | 6 | CH_oeu_2 | 11 | 15 | 7.0493e-30 |
| Olea europaea | scaffold1358 | 6 | CH_oeu_270 | 3 | 4 | 0.0000263176 |
| Prunus persica | Pp05 | 6 | CH_ppe_187 | 5 | 11 | 0.0000000000270126 |
| Papaver somniferum | NW_020618823.1 | 6 | CH_pso_296 | 4 | 5 | 0.000000000664773 |
| Papaver somniferum | NC_039363.1 | 6 | CH_pso_297 | 4 | 5 | 0.000000000664773 |
| Rhododendron simsii | chr04 | 6 | CH_rsi_173 | 5 | 8 | 0.000000000000407793 |
| Salix brachista | GWHAAZH00000016 | 6 | CH_sbr_255 | 3 | 3 | 0.000000119127 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 6 | CH_tpr_682 | 2 | 2 | 0.000454184 |
| Vigna mungo | CM024075.1 | 6 | CH_vmu_633 | 2 | 2 | 0.000969211 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |