Functional clusters
Information
- Type InterPro
- Description Ureohydrolase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr5 | 5 | CH_acertr_709 | 2 | 3 | 0.000211484 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.12 | 5 | CH_arhy_1210 | 2 | 3 | 0.000538871 |
| Camellia sinensis var. sinensis | Chr3 | 5 | CH_camsi_473 | 3 | 6 | 0.0000000630768 |
| Corchorus olitorius | AWUE01018676.1 | 5 | CH_col_192 | 2 | 3 | 0.000876168 |
| Capsella rubella | scaffold_6 | 5 | CH_cru_512 | 2 | 3 | 0.000219338 |
| Durio zibethinus | NW_019168004.1 | 5 | CH_dzi_595 | 2 | 4 | 0.000834215 |
| Gossypium hirsutum | A05 | 5 | CH_ghi_856 | 2 | 2 | 0.0000801047 |
| Helianthus annuus | HanXRQChr16 | 5 | CH_han_887 | 2 | 3 | 0.000115926 |
| Lotus japonicus | chr3 | 5 | CH_lja_54 | 4 | 4 | 0.00000000000109705 |
| Malus domestica | Chr02 | 5 | CH_mdo_961 | 2 | 2 | 0.000113763 |
| Medicago truncatula | chr4 | 5 | CH_mtr_1037 | 2 | 3 | 0.000123256 |
| Pisum sativum | chr6LG2 | 5 | CH_psa_208 | 3 | 4 | 0.0000000653034 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_424 | 3 | 3 | 0.00000000238391 |
| Simmondsia chinensis | GWHAASQ00000026 | 5 | CH_sci_48 | 4 | 4 | 0.0000000000018519 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_782 | 3 | 3 | 0.00000000355983 |
| Solanum lycopersicum | SL4.0ch01 | 5 | CH_sly_580 | 2 | 2 | 0.0000586941 |
| Solanum pennellii | Spenn-ch01 | 5 | CH_spe_546 | 2 | 2 | 0.000044479 |
| Theobroma cacao | Chromosome_8 | 5 | CH_tca_527 | 2 | 2 | 0.0000732386 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_545 | 5 | CH_tpr_480 | 2 | 2 | 0.0000756974 |
| Acer truncatum | chr5 | 6 | CH_acertr_709 | 2 | 3 | 0.000211484 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.12 | 6 | CH_arhy_1210 | 2 | 3 | 0.000538871 |
| Camellia sinensis var. sinensis | Chr3 | 6 | CH_camsi_473 | 3 | 6 | 0.0000000630768 |
| Corchorus olitorius | AWUE01018676.1 | 6 | CH_col_192 | 2 | 3 | 0.000876168 |
| Capsella rubella | scaffold_6 | 6 | CH_cru_512 | 2 | 3 | 0.000219338 |
| Durio zibethinus | NW_019168004.1 | 6 | CH_dzi_595 | 2 | 4 | 0.000834215 |
| Gossypium hirsutum | A05 | 6 | CH_ghi_856 | 2 | 2 | 0.0000801047 |
| Helianthus annuus | HanXRQChr16 | 6 | CH_han_887 | 2 | 3 | 0.000115926 |
| Lotus japonicus | chr3 | 6 | CH_lja_54 | 4 | 4 | 0.00000000000109705 |
| Malus domestica | Chr02 | 6 | CH_mdo_961 | 2 | 2 | 0.000113763 |
| Medicago truncatula | chr4 | 6 | CH_mtr_1037 | 2 | 3 | 0.000123256 |
| Pisum sativum | chr6LG2 | 6 | CH_psa_208 | 3 | 4 | 0.0000000653034 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_424 | 3 | 3 | 0.00000000238391 |
| Simmondsia chinensis | GWHAASQ00000026 | 6 | CH_sci_48 | 4 | 4 | 0.0000000000018519 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_782 | 3 | 3 | 0.00000000355983 |
| Solanum lycopersicum | SL4.0ch01 | 6 | CH_sly_580 | 2 | 2 | 0.0000586941 |
| Solanum pennellii | Spenn-ch01 | 6 | CH_spe_546 | 2 | 2 | 0.000044479 |
| Theobroma cacao | Chromosome_8 | 6 | CH_tca_527 | 2 | 2 | 0.0000732386 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_545 | 6 | CH_tpr_480 | 2 | 2 | 0.0000756974 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |