Functional clusters

Information

  • Type InterPro
  • Description Sucrose/H+ symporter, plant

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group28 5 CH_ach_217 3 10 0.0000106166
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 5 CH_arhy_571 3 3 0.000000489389
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 5 CH_arhy_572 3 3 0.000000489389
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_655 3 4 0.00000195728
Camellia sinensis var. sinensis Chr9 5 CH_camsi_224 4 4 0.0000000000101245
Chenopodium quinoa C_Quinoa_Scaffold_4250 5 CH_cqu_284 3 3 0.0000000336768
Daucus carota DCARv2_Chr4 5 CH_dca_679 2 2 0.000637775
Davidia involucrata GWHABJS00000002 5 CH_din_646 2 2 0.000300075
Durio zibethinus NW_019168004.1 5 CH_dzi_207 3 4 0.000000257773
Eucalyptus grandis Chr06 5 CH_egr_800 3 7 0.000000719221
Erythranthe guttata scaffold_3 5 CH_egut_589 2 2 0.000218444
Glycine max Gm16 5 CH_gma_141 4 4 0.0000000000206703
Lotus japonicus chr5 5 CH_lja_237 3 3 0.000000644306
Phaseolus vulgaris Chr04 5 CH_pvu_251 4 14 0.000000149814
Rhododendron simsii chr11 5 CH_rsi_62 9 25 1.91383e-22
Striga asiatica scaffold24 5 CH_sas_253 2 2 0.000938057
Striga asiatica scaffold118 5 CH_sas_47 3 3 0.00000011733
Salvia bowleyana GWHASIU00000005 5 CH_sbo_754 3 72 0.000738736
Simmondsia chinensis GWHAASQ00000023 5 CH_sci_126 3 3 0.000000108744
Theobroma cacao Chromosome_8 5 CH_tca_175 4 5 0.0000000000883912
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_201 3 3 0.000000129529
Vigna mungo CM024077.1 5 CH_vmu_272 3 13 0.0000178968
Actinidia chinensis Lachesis_group28 6 CH_ach_217 3 10 0.0000106166
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 6 CH_arhy_571 3 3 0.000000489389
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.09 6 CH_arhy_572 3 3 0.000000489389
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_655 3 4 0.00000195728
Camellia sinensis var. sinensis Chr9 6 CH_camsi_224 4 4 0.0000000000101245
Chenopodium quinoa C_Quinoa_Scaffold_4250 6 CH_cqu_284 3 3 0.0000000336768
Daucus carota DCARv2_Chr4 6 CH_dca_679 2 2 0.000637775
Davidia involucrata GWHABJS00000002 6 CH_din_646 2 2 0.000300075
Durio zibethinus NW_019168004.1 6 CH_dzi_207 3 4 0.000000257773
Eucalyptus grandis Chr06 6 CH_egr_800 3 7 0.000000719221
Erythranthe guttata scaffold_3 6 CH_egut_589 2 2 0.000218444
Fragaria x ananassa Fvb5-1 6 CH_fan_698 4 61 0.0000234649
Glycine max Gm16 6 CH_gma_141 4 4 0.0000000000206703
Lotus japonicus chr5 6 CH_lja_237 3 3 0.000000644306
Phaseolus vulgaris Chr04 6 CH_pvu_251 4 14 0.000000149814
Rhododendron simsii chr11 6 CH_rsi_62 9 25 1.91383e-22
Striga asiatica scaffold24 6 CH_sas_253 2 2 0.000938057
Striga asiatica scaffold118 6 CH_sas_47 3 3 0.00000011733
Salvia bowleyana GWHASIU00000005 6 CH_sbo_754 3 72 0.000738736
Simmondsia chinensis GWHAASQ00000023 6 CH_sci_126 3 3 0.000000108744
Theobroma cacao Chromosome_8 6 CH_tca_175 4 5 0.0000000000883912
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_201 3 3 0.000000129529
Vigna mungo CM024077.1 6 CH_vmu_272 3 13 0.0000178968

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001