Functional clusters
Information
- Type InterPro
- Description Cysteine synthase CysK
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr6 | 5 | CH_camsi_440 | 3 | 3 | 0.0000000315406 |
| Cannabis sativa | NC_044375.1 | 5 | CH_cansat_310 | 3 | 7 | 0.00000791901 |
| Capsicum annuum | PGAv.1.6.scaffold134 | 5 | CH_can_769 | 2 | 2 | 0.000495663 |
| Carpinus fangiana | Cfa02 | 5 | CH_cfa_244 | 3 | 3 | 0.000000301137 |
| Cardamine hirsuta | Chr6 | 5 | CH_chi_321 | 3 | 3 | 0.000000860004 |
| Carya illinoinensis | Chr07 | 5 | CH_cil_195 | 4 | 4 | 0.000000000050012 |
| Davidia involucrata | GWHABJS00000002 | 5 | CH_din_358 | 3 | 6 | 0.00000420071 |
| Durio zibethinus | NW_019168481.1 | 5 | CH_dzi_621 | 2 | 2 | 0.000973326 |
| Helianthus annuus | HanXRQChr10 | 5 | CH_han_1173 | 2 | 2 | 0.0008115 |
| Lotus japonicus | chr5 | 5 | CH_lja_236 | 3 | 3 | 0.000000644306 |
| Malus domestica | Chr04 | 5 | CH_mdo_378 | 4 | 9 | 0.0000000147275 |
| Manihot esculenta | Chromosome08 | 5 | CH_mes_323 | 3 | 3 | 0.000000469831 |
| Medicago truncatula | chr1 | 5 | CH_mtr_313 | 4 | 4 | 0.0000000000686679 |
| Medicago truncatula | chr4 | 5 | CH_mtr_709 | 3 | 4 | 0.000001671 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_589 | 2 | 2 | 0.000722526 |
| Punica granatum | NC_045131.1 | 5 | CH_pgr_292 | 3 | 4 | 0.00000189153 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_194 | 5 | 13 | 0.00000000000196844 |
| Populus trichocarpa | Chr05 | 5 | CH_ptr_113 | 5 | 5 | 0.0000000000000663097 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 5 | CH_rch_70 | 9 | 15 | 1.3291e-23 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_2531 | 2 | 2 | 0.000730727 |
| Trochodendron aralioides | group2 | 5 | CH_tar_360 | 3 | 4 | 0.00000181637 |
| Camellia sinensis var. sinensis | Chr6 | 6 | CH_camsi_440 | 3 | 3 | 0.0000000315406 |
| Cannabis sativa | NC_044375.1 | 6 | CH_cansat_310 | 3 | 7 | 0.00000791901 |
| Capsicum annuum | PGAv.1.6.scaffold134 | 6 | CH_can_769 | 2 | 2 | 0.000495663 |
| Carpinus fangiana | Cfa02 | 6 | CH_cfa_244 | 3 | 3 | 0.000000301137 |
| Cardamine hirsuta | Chr6 | 6 | CH_chi_321 | 3 | 3 | 0.000000860004 |
| Carya illinoinensis | Chr07 | 6 | CH_cil_195 | 4 | 4 | 0.000000000050012 |
| Cucumis melo | chr02 | 6 | CH_cme_99 | 4 | 5 | 0.000000000311722 |
| Davidia involucrata | GWHABJS00000002 | 6 | CH_din_358 | 3 | 6 | 0.00000420071 |
| Durio zibethinus | NW_019168481.1 | 6 | CH_dzi_621 | 2 | 2 | 0.000973326 |
| Helianthus annuus | HanXRQChr10 | 6 | CH_han_1173 | 2 | 2 | 0.0008115 |
| Lotus japonicus | chr5 | 6 | CH_lja_236 | 3 | 3 | 0.000000644306 |
| Malus domestica | Chr04 | 6 | CH_mdo_378 | 4 | 9 | 0.0000000147275 |
| Manihot esculenta | Chromosome08 | 6 | CH_mes_323 | 3 | 3 | 0.000000469831 |
| Medicago truncatula | chr1 | 6 | CH_mtr_313 | 4 | 4 | 0.0000000000686679 |
| Medicago truncatula | chr4 | 6 | CH_mtr_709 | 3 | 4 | 0.000001671 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_589 | 2 | 2 | 0.000722526 |
| Punica granatum | NC_045131.1 | 6 | CH_pgr_292 | 3 | 4 | 0.00000189153 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_194 | 5 | 13 | 0.00000000000196844 |
| Populus trichocarpa | Chr05 | 6 | CH_ptr_113 | 5 | 5 | 0.0000000000000663097 |
| Rosa chinensis | RcHm_v2.0_Chr3 | 6 | CH_rch_70 | 9 | 15 | 1.3291e-23 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_2531 | 2 | 2 | 0.000730727 |
| Trochodendron aralioides | group2 | 6 | CH_tar_360 | 3 | 4 | 0.00000181637 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |