Functional clusters
Information
- Type InterPro
- Description Linker histone H1/H5, domain H15
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 5 | CH_arhy_483 | 4 | 7 | 0.000000101217 |
| Arabidopsis thaliana | Chr1 | 5 | CH_ath_287 | 3 | 4 | 0.00000224043 |
| Brassica carinata | ChrC08 | 5 | CH_bca_1095 | 3 | 3 | 0.0000142742 |
| Brassica carinata | ChrC05 | 5 | CH_bca_748 | 4 | 9 | 0.000000920834 |
| Brassica napus | C05 | 5 | CH_bna_1211 | 3 | 6 | 0.000270867 |
| Chara braunii | BFEA01000343 | 5 | CH_cbr_302 | 2 | 2 | 0.000431562 |
| Daucus carota | DCARv2_Chr6 | 5 | CH_dca_2 | 16 | 16 | 1.6973e-42 |
| Helianthus annuus | HanXRQChr15 | 5 | CH_han_784 | 3 | 6 | 0.00003653 |
| Micromonas commoda | Chr_01 | 5 | CH_mco_22 | 2 | 2 | 0.000197961 |
| Medicago truncatula | chr1 | 5 | CH_mtr_1313 | 3 | 10 | 0.000536902 |
| Pisum sativum | chr6LG2 | 5 | CH_psa_32 | 8 | 12 | 2.27084e-18 |
| Solanum lycopersicum | SL4.0ch11 | 5 | CH_sly_195 | 5 | 12 | 0.000000000817738 |
| Solanum pennellii | Spenn-ch10 | 5 | CH_spe_272 | 4 | 7 | 0.0000000817341 |
| Solanum pennellii | Spenn-ch11 | 5 | CH_spe_584 | 3 | 5 | 0.0000525196 |
| Solanum tuberosum | ST4.03ch04 | 5 | CH_stu_947 | 4 | 75 | 0.000876081 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.15 | 6 | CH_arhy_483 | 4 | 7 | 0.000000101217 |
| Arabidopsis thaliana | Chr1 | 6 | CH_ath_287 | 3 | 4 | 0.00000224043 |
| Brassica carinata | ChrC08 | 6 | CH_bca_1095 | 3 | 3 | 0.0000142742 |
| Brassica carinata | ChrC05 | 6 | CH_bca_748 | 4 | 9 | 0.000000920834 |
| Brassica napus | C05 | 6 | CH_bna_1211 | 3 | 6 | 0.000270867 |
| Chara braunii | BFEA01000343 | 6 | CH_cbr_302 | 2 | 2 | 0.000431562 |
| Daucus carota | DCARv2_Chr6 | 6 | CH_dca_2 | 16 | 16 | 1.6973e-42 |
| Helianthus annuus | HanXRQChr15 | 6 | CH_han_784 | 3 | 6 | 0.00003653 |
| Micromonas commoda | Chr_01 | 6 | CH_mco_22 | 2 | 2 | 0.000197961 |
| Medicago truncatula | chr1 | 6 | CH_mtr_1313 | 3 | 10 | 0.000536902 |
| Pisum sativum | chr6LG2 | 6 | CH_psa_32 | 8 | 12 | 2.27084e-18 |
| Solanum lycopersicum | SL4.0ch11 | 6 | CH_sly_195 | 5 | 12 | 0.000000000817738 |
| Solanum pennellii | Spenn-ch10 | 6 | CH_spe_272 | 4 | 7 | 0.0000000817341 |
| Solanum pennellii | Spenn-ch11 | 6 | CH_spe_584 | 3 | 5 | 0.0000525196 |
| Solanum tuberosum | ST4.03ch04 | 6 | CH_stu_947 | 4 | 75 | 0.000876081 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |