Functional clusters

Information

  • Type InterPro
  • Description Succinate--CoA synthetase, beta subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carica papaya supercontig_165 5 CH_cpa_309 2 2 0.0000950661
Fragaria vesca Fvb2 5 CH_fve_771 2 5 0.00058905
Gossypium hirsutum A07 5 CH_ghi_949 2 2 0.000160209
Gossypium hirsutum D07 5 CH_ghi_950 2 2 0.000160209
Gossypium raimondii Chr01 5 CH_gra_422 2 2 0.0000536107
Lupinus albus Lalb_Chr21 5 CH_lal_605 2 2 0.000314895
Lonicera japonica GWHAAZE00000002 5 CH_lonja_484 3 6 0.000000430325
Magnolia biondii Chr10 5 CH_mbi_496 3 6 0.000000707488
Quercus lobata 9 5 CH_qlo_1397 2 3 0.000154883
Trochodendron aralioides group16 5 CH_tar_653 2 2 0.00018011
Carica papaya supercontig_165 6 CH_cpa_309 2 2 0.0000950661
Fragaria vesca Fvb2 6 CH_fve_771 2 5 0.00058905
Gossypium hirsutum A07 6 CH_ghi_949 2 2 0.000160209
Gossypium hirsutum D07 6 CH_ghi_950 2 2 0.000160209
Gossypium raimondii Chr01 6 CH_gra_422 2 2 0.0000536107
Lupinus albus Lalb_Chr21 6 CH_lal_605 2 2 0.000314895
Lonicera japonica GWHAAZE00000002 6 CH_lonja_484 3 6 0.000000430325
Magnolia biondii Chr10 6 CH_mbi_496 3 6 0.000000707488
Quercus lobata 9 6 CH_qlo_1397 2 3 0.000154883
Trochodendron aralioides group16 6 CH_tar_653 2 2 0.00018011

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001