Functional clusters

Information

  • Type InterPro
  • Description Chloroplast protein import component Tic20

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr1 5 CH_ath_515 2 2 0.000286492
Brassica carinata ChrC04 5 CH_bca_1787 2 2 0.000448905
Brassica carinata ChrB01 5 CH_bca_1788 2 2 0.000448905
Brassica oleracea C9 5 CH_bol_907 2 3 0.000980536
Chara braunii BFEA01000027 5 CH_cbr_320 2 3 0.000647303
Coffea canephora chr9 5 CH_ccan_601 2 7 0.000383294
Daucus carota DCARv2_Chr1 5 CH_dca_598 2 2 0.000382665
Gossypium raimondii Chr12 5 CH_gra_667 2 2 0.00080416
Lonicera japonica GWHAAZE00000001 5 CH_lonja_1054 2 2 0.000359324
Medicago truncatula chr2 5 CH_mtr_1342 2 2 0.000616295
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_1465 2 2 0.00083717
Salvia bowleyana GWHASIU00000001 5 CH_sbo_652 2 2 0.000272988
Trifolium pratense Tp57577_TGAC_v2_LG1 5 CH_tpr_763 2 2 0.000756974
Arabidopsis thaliana Chr1 6 CH_ath_515 2 2 0.000286492
Brassica carinata ChrC04 6 CH_bca_1787 2 2 0.000448905
Brassica carinata ChrB01 6 CH_bca_1788 2 2 0.000448905
Brassica oleracea C9 6 CH_bol_907 2 3 0.000980536
Chara braunii BFEA01000027 6 CH_cbr_320 2 3 0.000647303
Coffea canephora chr9 6 CH_ccan_601 2 7 0.000383294
Daucus carota DCARv2_Chr1 6 CH_dca_598 2 2 0.000382665
Gossypium raimondii Chr12 6 CH_gra_667 2 2 0.00080416
Lonicera japonica GWHAAZE00000001 6 CH_lonja_1054 2 2 0.000359324
Medicago truncatula chr2 6 CH_mtr_1342 2 2 0.000616295
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_1465 2 2 0.00083717
Salvia bowleyana GWHASIU00000001 6 CH_sbo_652 2 2 0.000272988
Trifolium pratense Tp57577_TGAC_v2_LG1 6 CH_tpr_763 2 2 0.000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001