Functional clusters
Information
- Type InterPro
- Description Fumarate hydratase, class II
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group19 | 5 | CH_ach_177 | 3 | 15 | 0.00000201332 |
| Brassica carinata | ChrC02 | 5 | CH_bca_2013 | 2 | 2 | 0.000769551 |
| Brassica carinata | ChrC09 | 5 | CH_bca_496 | 3 | 3 | 0.0000000575765 |
| Brassica napus | C04 | 5 | CH_bna_607 | 3 | 6 | 0.00000124012 |
| Brassica oleracea | C4 | 5 | CH_bol_289 | 3 | 8 | 0.000000358932 |
| Camellia sinensis var. sinensis | Chr13 | 5 | CH_camsi_220 | 6 | 63 | 0.00000000000862734 |
| Capsella rubella | scaffold_8 | 5 | CH_cru_519 | 2 | 2 | 0.000219346 |
| Davidia involucrata | GWHABJS00000007 | 5 | CH_din_635 | 2 | 2 | 0.000300075 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_1144 | 2 | 3 | 0.000175577 |
| Fragaria vesca | Fvb2 | 5 | CH_fve_534 | 2 | 2 | 0.0000589102 |
| Glycine max | Gm02 | 5 | CH_gma_708 | 2 | 2 | 0.000227734 |
| Lupinus albus | Lalb_Chr02 | 5 | CH_lal_149 | 3 | 3 | 0.0000000165269 |
| Phaseolus vulgaris | Chr07 | 5 | CH_pvu_426 | 2 | 2 | 0.0000734727 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_955 | 2 | 2 | 0.0000398653 |
| Solanum lycopersicum | SL4.0ch06 | 5 | CH_sly_261 | 3 | 3 | 0.0000000206706 |
| Vigna mungo | CM024071.1 | 5 | CH_vmu_311 | 2 | 2 | 0.0000646141 |
| Actinidia chinensis | Lachesis_group19 | 6 | CH_ach_177 | 3 | 15 | 0.00000201332 |
| Brassica carinata | ChrC02 | 6 | CH_bca_2013 | 2 | 2 | 0.000769551 |
| Brassica carinata | ChrC09 | 6 | CH_bca_496 | 3 | 3 | 0.0000000575765 |
| Brassica napus | C04 | 6 | CH_bna_607 | 3 | 6 | 0.00000124012 |
| Brassica oleracea | C4 | 6 | CH_bol_289 | 3 | 8 | 0.000000358932 |
| Camellia sinensis var. sinensis | Chr13 | 6 | CH_camsi_220 | 6 | 63 | 0.00000000000862734 |
| Capsella rubella | scaffold_8 | 6 | CH_cru_519 | 2 | 2 | 0.000219346 |
| Davidia involucrata | GWHABJS00000007 | 6 | CH_din_635 | 2 | 2 | 0.000300075 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_1144 | 2 | 3 | 0.000175577 |
| Fragaria vesca | Fvb2 | 6 | CH_fve_534 | 2 | 2 | 0.0000589102 |
| Glycine max | Gm02 | 6 | CH_gma_708 | 2 | 2 | 0.000227734 |
| Lupinus albus | Lalb_Chr02 | 6 | CH_lal_149 | 3 | 3 | 0.0000000165269 |
| Phaseolus vulgaris | Chr07 | 6 | CH_pvu_426 | 2 | 2 | 0.0000734727 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_955 | 2 | 2 | 0.0000398653 |
| Solanum lycopersicum | SL4.0ch06 | 6 | CH_sly_261 | 3 | 3 | 0.0000000206706 |
| Vigna mungo | CM024071.1 | 6 | CH_vmu_311 | 2 | 2 | 0.0000646141 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |