Functional clusters

Information

  • Type InterPro
  • Description CG-1 DNA-binding domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr2 5 CH_acertr_155 5 22 0.00000000122577
Corylus avellana 8 5 CH_cav_426 3 7 0.000025902
Chara braunii BFEA01000016 5 CH_cbr_319 2 3 0.000647303
Coffea canephora chr7 5 CH_ccan_625 2 6 0.000425883
Lupinus albus Lalb_Chr13 5 CH_lal_377 3 8 0.000038142
Lonicera japonica GWHAAZE00000003 5 CH_lonja_1217 2 2 0.000898311
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1268 3 28 0.000272794
Simmondsia chinensis GWHAASQ00000013 5 CH_sci_454 2 2 0.000510856
Acer truncatum chr2 6 CH_acertr_155 5 22 0.00000000122577
Corylus avellana 8 6 CH_cav_426 3 7 0.000025902
Chara braunii BFEA01000016 6 CH_cbr_319 2 3 0.000647303
Coffea canephora chr7 6 CH_ccan_625 2 6 0.000425883
Fragaria x ananassa Fvb1-1 6 CH_fan_548 3 5 0.00000418987
Lupinus albus Lalb_Chr13 6 CH_lal_377 3 8 0.000038142
Lonicera japonica GWHAAZE00000003 6 CH_lonja_1217 2 2 0.000898311
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1268 3 28 0.000272794
Simmondsia chinensis GWHAASQ00000013 6 CH_sci_454 2 2 0.000510856

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001