Functional clusters
Information
- Type InterPro
- Description B3 domain-containing protein At2g31720-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-1 | 5 | CH_aar_102 | 6 | 16 | 0.000000000669883 |
| Aethionema arabicum | LG-8 | 5 | CH_aar_21 | 9 | 9 | 9.74607e-23 |
| Aethionema arabicum | LG-7 | 5 | CH_aar_36 | 8 | 10 | 4.36059e-18 |
| Acer truncatum | chr3 | 5 | CH_acertr_132 | 4 | 5 | 0.000000000183935 |
| Actinidia chinensis | Lachesis_group27 | 5 | CH_ach_142 | 3 | 3 | 0.000000531158 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.04 | 5 | CH_arhy_180 | 5 | 6 | 0.00000000000000455516 |
| Arabidopsis thaliana | Chr2 | 5 | CH_ath_573 | 4 | 74 | 0.000478757 |
| Brassica carinata | ChrC02 | 5 | CH_bca_1122 | 3 | 3 | 0.0000211498 |
| Brassica carinata | ChrB02 | 5 | CH_bca_1123 | 3 | 3 | 0.0000211498 |
| Brassica carinata | ChrC07 | 5 | CH_bca_1371 | 3 | 4 | 0.0000845609 |
| Brassica carinata | ChrB06 | 5 | CH_bca_223 | 7 | 44 | 0.0000000000850328 |
| Brassica carinata | ChrC02 | 5 | CH_bca_291 | 5 | 9 | 0.000000000902459 |
| Brassica carinata | ChrC02 | 5 | CH_bca_406 | 4 | 4 | 0.0000000124332 |
| Brassica napus | A05 | 5 | CH_bna_1035 | 3 | 4 | 0.0000743689 |
| Brassica napus | C04 | 5 | CH_bna_18 | 13 | 66 | 3.34066e-25 |
| Brassica napus | A04 | 5 | CH_bna_249 | 7 | 60 | 0.000000000529969 |
| Brassica napus | C04 | 5 | CH_bna_859 | 3 | 3 | 0.0000185999 |
| Brassica oleracea | C4 | 5 | CH_bol_423 | 3 | 3 | 0.00000794891 |
| Brassica oleracea | C4 | 5 | CH_bol_46 | 8 | 36 | 0.00000000000000395717 |
| Brassica rapa | A05 | 5 | CH_bra_272 | 3 | 3 | 0.00000808678 |
| Brassica rapa | A04 | 5 | CH_bra_76 | 7 | 57 | 0.000000000113531 |
| Cannabis sativa | NC_044372.1 | 5 | CH_cansat_150 | 5 | 63 | 0.00000000586109 |
| Cicer arietinum L. | Ca_LG7_v3 | 5 | CH_car_179 | 3 | 15 | 0.000041296 |
| Corylus avellana | 1 | 5 | CH_cav_32 | 9 | 43 | 2.62928e-19 |
| Carpinus fangiana | Cfa06 | 5 | CH_cfa_134 | 5 | 6 | 0.0000000000973371 |
| Carpinus fangiana | Cfa02 | 5 | CH_cfa_27 | 11 | 20 | 3.12986e-25 |
| Carya illinoinensis | Chr03 | 5 | CH_cil_124 | 5 | 7 | 0.000000000000130179 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3973 | 5 | CH_cqu_996 | 2 | 2 | 0.000710732 |
| Cucumis sativus L. | chr5 | 5 | CH_csa_176 | 5 | 50 | 0.000000096456 |
| Durio zibethinus | NW_019168004.1 | 5 | CH_dzi_345 | 3 | 6 | 0.000023444 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 5 | CH_eca_369 | 3 | 3 | 0.00000205383 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 5 | CH_eca_7 | 11 | 29 | 5.51509e-28 |
| Eucalyptus grandis | Chr09 | 5 | CH_egr_551 | 5 | 25 | 0.00000000215293 |
| Erythranthe guttata | scaffold_13 | 5 | CH_egut_299 | 4 | 10 | 0.00000024301 |
| Gossypium hirsutum | A12 | 5 | CH_ghi_704 | 3 | 4 | 0.00000983686 |
| Gossypium raimondii | Chr08 | 5 | CH_gra_374 | 3 | 8 | 0.0000135115 |
| Helianthus annuus | HanXRQChr16 | 5 | CH_han_731 | 3 | 12 | 0.0000172356 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 5 | CH_lsa_5 | 13 | 22 | 2.70338e-38 |
| Medicago truncatula | chr5 | 5 | CH_mtr_362 | 4 | 5 | 0.000000000514931 |
| Medicago truncatula | chr3 | 5 | CH_mtr_436 | 4 | 8 | 0.00000000720575 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_381 | 2 | 2 | 0.0000481684 |
| Olea europaea | chr18 | 5 | CH_oeu_246 | 3 | 5 | 0.00000939907 |
| Olea europaea | chr15 | 5 | CH_oeu_36 | 5 | 6 | 0.000000000000289338 |
| Petunia axillaris | Peaxi162Scf00665 | 5 | CH_pax_275 | 3 | 3 | 0.00000163353 |
| Punica granatum | NC_045134.1 | 5 | CH_pgr_277 | 3 | 3 | 0.0000010135 |
| Prunus persica | Pp07 | 5 | CH_ppe_259 | 4 | 4 | 0.00000000296413 |
| Phaseolus vulgaris | Chr06 | 5 | CH_pvu_316 | 3 | 3 | 0.00000133611 |
| Quercus lobata | 1 | 5 | CH_qlo_1124 | 3 | 3 | 0.0000162336 |
| Quercus lobata | 10 | 5 | CH_qlo_1616 | 3 | 6 | 0.000324137 |
| Quercus lobata | 11 | 5 | CH_qlo_668 | 6 | 37 | 0.0000000112011 |
| Quercus lobata | 3 | 5 | CH_qlo_800 | 6 | 55 | 0.000000138282 |
| Rhododendron simsii | chr02 | 5 | CH_rsi_248 | 6 | 52 | 0.000000000106971 |
| Salix brachista | GWHAAZH00000019 | 5 | CH_sbr_16 | 11 | 11 | 2.10498e-30 |
| Salix brachista | GWHAAZH00000011 | 5 | CH_sbr_250 | 4 | 5 | 0.000000102795 |
| Salix brachista | GWHAAZH00000017 | 5 | CH_sbr_43 | 8 | 10 | 3.27098e-19 |
| Simmondsia chinensis | GWHAASQ00000022 | 5 | CH_sci_329 | 3 | 8 | 0.000100329 |
| Simmondsia chinensis | GWHAASQ00000007 | 5 | CH_sci_485 | 3 | 14 | 0.000650976 |
| Simmondsia chinensis | GWHAASQ00000009 | 5 | CH_sci_81 | 5 | 18 | 0.00000000155539 |
| Sechium edule | LG14 | 5 | CH_sed_213 | 3 | 3 | 0.00000167965 |
| Solanum lycopersicum | SL4.0ch02 | 5 | CH_sly_247 | 4 | 9 | 0.00000000962419 |
| Solanum pennellii | Spenn-ch02 | 5 | CH_spe_183 | 4 | 8 | 0.00000000232751 |
| Solanum tuberosum | ST4.03ch02 | 5 | CH_stu_278 | 4 | 7 | 0.0000000100976 |
| Theobroma cacao | Chromosome_10 | 5 | CH_tca_434 | 4 | 35 | 0.00000773202 |
| Theobroma cacao | Chromosome_3 | 5 | CH_tca_472 | 3 | 7 | 0.0000236366 |
| Tarenaya hassleriana | NW_010967707.1 | 5 | CH_tha_63 | 5 | 20 | 0.000000000695685 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 5 | CH_tpr_520 | 3 | 8 | 0.0000793169 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 5 | CH_tpr_724 | 3 | 14 | 0.000514741 |
| Tripterygium wilfordii | NC_052235.1 | 5 | CH_twi_495 | 2 | 2 | 0.000557507 |
| Utricularia gibba | unitig_26 | 5 | CH_ugi_218 | 3 | 42 | 0.000115742 |
| Vigna mungo | CM024077.1 | 5 | CH_vmu_515 | 2 | 2 | 0.000387685 |
| Vigna mungo | CM024079.1 | 5 | CH_vmu_516 | 2 | 2 | 0.000387685 |
| Zea mays | 8 | 5 | CH_zma_114 | 3 | 3 | 0.00000000392171 |
| Aethionema arabicum | LG-1 | 6 | CH_aar_102 | 6 | 16 | 0.000000000669883 |
| Aethionema arabicum | LG-8 | 6 | CH_aar_21 | 9 | 9 | 9.74607e-23 |
| Aethionema arabicum | LG-7 | 6 | CH_aar_36 | 8 | 10 | 4.36059e-18 |
| Acer truncatum | chr3 | 6 | CH_acertr_132 | 4 | 5 | 0.000000000183935 |
| Actinidia chinensis | Lachesis_group27 | 6 | CH_ach_142 | 3 | 3 | 0.000000531158 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.04 | 6 | CH_arhy_180 | 5 | 6 | 0.00000000000000455516 |
| Arabidopsis thaliana | Chr2 | 6 | CH_ath_573 | 4 | 74 | 0.000478757 |
| Brassica carinata | ChrC02 | 6 | CH_bca_1122 | 3 | 3 | 0.0000211498 |
| Brassica carinata | ChrB02 | 6 | CH_bca_1123 | 3 | 3 | 0.0000211498 |
| Brassica carinata | ChrC07 | 6 | CH_bca_1371 | 3 | 4 | 0.0000845609 |
| Brassica carinata | ChrB06 | 6 | CH_bca_223 | 7 | 44 | 0.0000000000850328 |
| Brassica carinata | ChrC02 | 6 | CH_bca_291 | 5 | 9 | 0.000000000902459 |
| Brassica carinata | ChrC02 | 6 | CH_bca_406 | 4 | 4 | 0.0000000124332 |
| Brassica napus | A05 | 6 | CH_bna_1035 | 3 | 4 | 0.0000743689 |
| Brassica napus | C04 | 6 | CH_bna_18 | 13 | 66 | 3.34066e-25 |
| Brassica napus | A04 | 6 | CH_bna_249 | 7 | 60 | 0.000000000529969 |
| Brassica napus | C04 | 6 | CH_bna_859 | 3 | 3 | 0.0000185999 |
| Brassica oleracea | C4 | 6 | CH_bol_423 | 3 | 3 | 0.00000794891 |
| Brassica oleracea | C4 | 6 | CH_bol_46 | 8 | 36 | 0.00000000000000395717 |
| Brassica rapa | A05 | 6 | CH_bra_272 | 3 | 3 | 0.00000808678 |
| Brassica rapa | A04 | 6 | CH_bra_76 | 7 | 57 | 0.000000000113531 |
| Cannabis sativa | NC_044372.1 | 6 | CH_cansat_150 | 5 | 63 | 0.00000000586109 |
| Cicer arietinum L. | Ca_LG7_v3 | 6 | CH_car_179 | 3 | 15 | 0.000041296 |
| Corylus avellana | 1 | 6 | CH_cav_32 | 9 | 43 | 2.62928e-19 |
| Carpinus fangiana | Cfa06 | 6 | CH_cfa_134 | 5 | 6 | 0.0000000000973371 |
| Carpinus fangiana | Cfa02 | 6 | CH_cfa_27 | 11 | 20 | 3.12986e-25 |
| Carya illinoinensis | Chr03 | 6 | CH_cil_124 | 5 | 7 | 0.000000000000130179 |
| Cucumis melo | chr09 | 6 | CH_cme_178 | 5 | 62 | 0.000000239907 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3973 | 6 | CH_cqu_996 | 2 | 2 | 0.000710732 |
| Cucumis sativus L. | chr5 | 6 | CH_csa_176 | 5 | 50 | 0.000000096456 |
| Durio zibethinus | NW_019168004.1 | 6 | CH_dzi_345 | 3 | 6 | 0.000023444 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 6 | CH_eca_369 | 3 | 3 | 0.00000205383 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 6 | CH_eca_7 | 11 | 29 | 5.51509e-28 |
| Eucalyptus grandis | Chr09 | 6 | CH_egr_551 | 5 | 25 | 0.00000000215293 |
| Erythranthe guttata | scaffold_13 | 6 | CH_egut_299 | 4 | 10 | 0.00000024301 |
| Fragaria x ananassa | Fvb5-2 | 6 | CH_fan_236 | 4 | 4 | 0.00000000474973 |
| Gossypium hirsutum | A12 | 6 | CH_ghi_704 | 3 | 4 | 0.00000983686 |
| Gossypium raimondii | Chr08 | 6 | CH_gra_374 | 3 | 8 | 0.0000135115 |
| Helianthus annuus | HanXRQChr16 | 6 | CH_han_731 | 3 | 12 | 0.0000172356 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 6 | CH_lsa_5 | 13 | 22 | 2.70338e-38 |
| Medicago truncatula | chr5 | 6 | CH_mtr_362 | 4 | 5 | 0.000000000514931 |
| Medicago truncatula | chr3 | 6 | CH_mtr_436 | 4 | 8 | 0.00000000720575 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_381 | 2 | 2 | 0.0000481684 |
| Olea europaea | chr18 | 6 | CH_oeu_246 | 3 | 5 | 0.00000939907 |
| Olea europaea | chr15 | 6 | CH_oeu_36 | 5 | 6 | 0.000000000000289338 |
| Petunia axillaris | Peaxi162Scf00665 | 6 | CH_pax_275 | 3 | 3 | 0.00000163353 |
| Punica granatum | NC_045134.1 | 6 | CH_pgr_277 | 3 | 3 | 0.0000010135 |
| Prunus persica | Pp07 | 6 | CH_ppe_259 | 4 | 4 | 0.00000000296413 |
| Phaseolus vulgaris | Chr06 | 6 | CH_pvu_316 | 3 | 3 | 0.00000133611 |
| Quercus lobata | 1 | 6 | CH_qlo_1124 | 3 | 3 | 0.0000162336 |
| Quercus lobata | 10 | 6 | CH_qlo_1616 | 3 | 6 | 0.000324137 |
| Quercus lobata | 11 | 6 | CH_qlo_668 | 6 | 37 | 0.0000000112011 |
| Quercus lobata | 3 | 6 | CH_qlo_800 | 6 | 55 | 0.000000138282 |
| Rhododendron simsii | chr02 | 6 | CH_rsi_248 | 6 | 52 | 0.000000000106971 |
| Salix brachista | GWHAAZH00000019 | 6 | CH_sbr_16 | 11 | 11 | 2.10498e-30 |
| Salix brachista | GWHAAZH00000011 | 6 | CH_sbr_250 | 4 | 5 | 0.000000102795 |
| Salix brachista | GWHAAZH00000017 | 6 | CH_sbr_43 | 8 | 10 | 3.27098e-19 |
| Simmondsia chinensis | GWHAASQ00000022 | 6 | CH_sci_329 | 3 | 8 | 0.000100329 |
| Simmondsia chinensis | GWHAASQ00000007 | 6 | CH_sci_485 | 3 | 14 | 0.000650976 |
| Simmondsia chinensis | GWHAASQ00000009 | 6 | CH_sci_81 | 5 | 18 | 0.00000000155539 |
| Sechium edule | LG14 | 6 | CH_sed_213 | 3 | 3 | 0.00000167965 |
| Solanum lycopersicum | SL4.0ch02 | 6 | CH_sly_247 | 4 | 9 | 0.00000000962419 |
| Solanum pennellii | Spenn-ch02 | 6 | CH_spe_183 | 4 | 8 | 0.00000000232751 |
| Solanum tuberosum | ST4.03ch02 | 6 | CH_stu_278 | 4 | 7 | 0.0000000100976 |
| Theobroma cacao | Chromosome_10 | 6 | CH_tca_434 | 4 | 35 | 0.00000773202 |
| Theobroma cacao | Chromosome_3 | 6 | CH_tca_472 | 3 | 7 | 0.0000236366 |
| Tarenaya hassleriana | NW_010967707.1 | 6 | CH_tha_63 | 5 | 20 | 0.000000000695685 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 6 | CH_tpr_520 | 3 | 8 | 0.0000793169 |
| Trifolium pratense | Tp57577_TGAC_v2_LG4 | 6 | CH_tpr_724 | 3 | 14 | 0.000514741 |
| Tripterygium wilfordii | NC_052235.1 | 6 | CH_twi_495 | 2 | 2 | 0.000557507 |
| Utricularia gibba | unitig_26 | 6 | CH_ugi_218 | 3 | 42 | 0.000115742 |
| Vigna mungo | CM024077.1 | 6 | CH_vmu_515 | 2 | 2 | 0.000387685 |
| Vigna mungo | CM024079.1 | 6 | CH_vmu_516 | 2 | 2 | 0.000387685 |
| Zea mays | 8 | 6 | CH_zma_114 | 3 | 3 | 0.00000000392171 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |