Functional clusters

Information

  • Type InterPro
  • Description Ribosomal protein L5 eukaryotic/L18 archaeal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica rapa A03 5 CH_bra_458 2 2 0.000257588
Camellia sinensis var. sinensis Chr9 5 CH_camsi_1492 2 3 0.000825341
Ceratophyllum demersum 3 5 CH_cde_313 2 2 0.000236939
Eucalyptus grandis Chr07 5 CH_egr_1278 2 2 0.000351165
Erythranthe guttata scaffold_4 5 CH_egut_588 2 2 0.000218444
Lonicera japonica GWHAAZE00000104 5 CH_lonja_216 5 10 0.00000000000136095
Malus domestica Chr15 5 CH_mdo_1229 2 2 0.000379212
Manihot esculenta Chromosome05 5 CH_mes_580 2 2 0.000183189
Oryza sativa ssp. japonica chr01 5 CH_osa_478 2 2 0.0000528123
Punica granatum NC_045130.1 5 CH_pgr_498 2 2 0.000225107
Papaver somniferum NC_039358.1 5 CH_pso_1127 2 3 0.000405518
Papaver somniferum NC_039362.1 5 CH_pso_964 2 2 0.000135176
Salix brachista GWHAAZH00000014 5 CH_sbr_657 2 2 0.00063014
Vitis vinifera chrUn 5 CH_vvi_684 2 2 0.000456378
Brassica rapa A03 6 CH_bra_458 2 2 0.000257588
Camellia sinensis var. sinensis Chr9 6 CH_camsi_1492 2 3 0.000825341
Ceratophyllum demersum 3 6 CH_cde_313 2 2 0.000236939
Eucalyptus grandis Chr07 6 CH_egr_1278 2 2 0.000351165
Erythranthe guttata scaffold_4 6 CH_egut_588 2 2 0.000218444
Lonicera japonica GWHAAZE00000104 6 CH_lonja_216 5 10 0.00000000000136095
Malus domestica Chr15 6 CH_mdo_1229 2 2 0.000379212
Manihot esculenta Chromosome05 6 CH_mes_580 2 2 0.000183189
Oryza sativa ssp. japonica chr01 6 CH_osa_478 2 2 0.0000528123
Punica granatum NC_045130.1 6 CH_pgr_498 2 2 0.000225107
Papaver somniferum NC_039358.1 6 CH_pso_1127 2 3 0.000405518
Papaver somniferum NC_039362.1 6 CH_pso_964 2 2 0.000135176
Salix brachista GWHAAZH00000014 6 CH_sbr_657 2 2 0.00063014
Vitis vinifera chrUn 6 CH_vvi_684 2 2 0.000456378

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001