Functional clusters

Information

  • Type InterPro
  • Description Profilin

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr7 5 CH_acertr_748 2 2 0.000211491
Arabidopsis lyrata scaffold_7 5 CH_aly_723 2 2 0.000990066
Arabidopsis lyrata scaffold_3 5 CH_aly_724 2 2 0.000990066
Arabidopsis thaliana Chr4 5 CH_ath_606 2 2 0.000601633
Amborella trichopoda AmTr_v1.0_scaffold00056 5 CH_atr_486 2 3 0.000238322
Beta vulgaris Chr2_EL10_PGA_scaffold6 5 CH_bvu_526 2 2 0.000827917
Cannabis sativa NC_044371.1 5 CH_cansat_169 4 15 0.0000000173766
Corylus avellana 8 5 CH_cav_724 2 2 0.000460017
Coffea canephora chr6 5 CH_ccan_718 2 10 0.000919892
Citrus clementina scaffold_1 5 CH_ccl_709 2 2 0.000492187
Carpinus fangiana Cfa01 5 CH_cfa_550 2 2 0.000454408
Corchorus olitorius AWUE01022432.1 5 CH_col_211 2 2 0.000876296
Carica papaya supercontig_78 5 CH_cpa_308 2 2 0.0000950661
Cucumis sativus L. chr2 5 CH_csa_454 2 2 0.000500856
Erigeron canadensis Conyza_canadensis_scaffold:5 5 CH_eca_757 2 2 0.000448722
Glycine max Gm08 5 CH_gma_354 3 3 0.000000259319
Lupinus albus Lalb_Chr14 5 CH_lal_269 3 3 0.00000150394
Lupinus albus Lalb_Chr09 5 CH_lal_270 3 3 0.00000150394
Lupinus albus Lalb_Chr05 5 CH_lal_323 3 4 0.00000601432
Lotus japonicus chr2 5 CH_lja_601 2 2 0.000715077
Lonicera japonica GWHAAZE00000007 5 CH_lonja_1216 2 2 0.000898311
Magnolia biondii Chr04 5 CH_mbi_321 3 3 0.0000000141523
Medicago truncatula chr7 5 CH_mtr_1393 2 3 0.000739518
Olea europaea chr13 5 CH_oeu_160 3 3 0.000000239348
Oryza sativa ssp. japonica chr10 5 CH_osa_643 2 2 0.000316874
Pisum sativum chr7LG7 5 CH_psa_439 2 2 0.0000521635
Phaseolus vulgaris Chr02 5 CH_pvu_259 3 3 0.000000161953
Quercus lobata CM012294 5 CH_qlo_773 3 3 0.0000000799683
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_923 4 65 0.0000268349
Trochodendron aralioides group9 5 CH_tar_373 3 4 0.00000259476
Theobroma cacao Chromosome_9 5 CH_tca_748 2 2 0.000732386
Trifolium pratense Tp57577_TGAC_v2_LG3 5 CH_tpr_681 2 2 0.000454184
Vigna mungo CM024069.1 5 CH_vmu_514 2 2 0.000387685
Vitis vinifera chr11 5 CH_vvi_773 2 2 0.00076063
Acer truncatum chr7 6 CH_acertr_748 2 2 0.000211491
Arabidopsis lyrata scaffold_7 6 CH_aly_723 2 2 0.000990066
Arabidopsis lyrata scaffold_3 6 CH_aly_724 2 2 0.000990066
Arabidopsis thaliana Chr4 6 CH_ath_606 2 2 0.000601633
Amborella trichopoda AmTr_v1.0_scaffold00056 6 CH_atr_486 2 3 0.000238322
Beta vulgaris Chr2_EL10_PGA_scaffold6 6 CH_bvu_526 2 2 0.000827917
Cannabis sativa NC_044371.1 6 CH_cansat_169 4 15 0.0000000173766
Corylus avellana 8 6 CH_cav_724 2 2 0.000460017
Coffea canephora chr6 6 CH_ccan_718 2 10 0.000919892
Citrus clementina scaffold_1 6 CH_ccl_709 2 2 0.000492187
Carpinus fangiana Cfa01 6 CH_cfa_550 2 2 0.000454408
Cucumis melo chr05 6 CH_cme_417 2 2 0.000400267
Corchorus olitorius AWUE01022432.1 6 CH_col_211 2 2 0.000876296
Carica papaya supercontig_78 6 CH_cpa_308 2 2 0.0000950661
Cucumis sativus L. chr2 6 CH_csa_454 2 2 0.000500856
Erigeron canadensis Conyza_canadensis_scaffold:5 6 CH_eca_757 2 2 0.000448722
Fragaria x ananassa Fvb1-4 6 CH_fan_585 3 5 0.00000585333
Glycine max Gm08 6 CH_gma_354 3 3 0.000000259319
Lupinus albus Lalb_Chr14 6 CH_lal_269 3 3 0.00000150394
Lupinus albus Lalb_Chr09 6 CH_lal_270 3 3 0.00000150394
Lupinus albus Lalb_Chr05 6 CH_lal_323 3 4 0.00000601432
Lotus japonicus chr2 6 CH_lja_601 2 2 0.000715077
Lonicera japonica GWHAAZE00000007 6 CH_lonja_1216 2 2 0.000898311
Magnolia biondii Chr04 6 CH_mbi_321 3 3 0.0000000141523
Medicago truncatula chr7 6 CH_mtr_1393 2 3 0.000739518
Olea europaea chr13 6 CH_oeu_160 3 3 0.000000239348
Oryza sativa ssp. japonica chr10 6 CH_osa_643 2 2 0.000316874
Pisum sativum chr7LG7 6 CH_psa_439 2 2 0.0000521635
Phaseolus vulgaris Chr02 6 CH_pvu_259 3 3 0.000000161953
Quercus lobata CM012294 6 CH_qlo_773 3 3 0.0000000799683
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_923 4 65 0.0000268349
Trochodendron aralioides group9 6 CH_tar_373 3 4 0.00000259476
Theobroma cacao Chromosome_9 6 CH_tca_748 2 2 0.000732386
Trifolium pratense Tp57577_TGAC_v2_LG3 6 CH_tpr_681 2 2 0.000454184
Vigna mungo CM024069.1 6 CH_vmu_514 2 2 0.000387685
Vitis vinifera chr11 6 CH_vvi_773 2 2 0.00076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001