Functional clusters
Information
- Type InterPro
- Description Mitochondrial pyruvate carrier
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica napus | A09 | 5 | CH_bna_637 | 3 | 5 | 0.00000188086 |
| Brassica oleracea | C9 | 5 | CH_bol_383 | 3 | 6 | 0.00000269165 |
| Capsella rubella | scaffold_6 | 5 | CH_cru_591 | 2 | 2 | 0.000438693 |
| Daucus carota | DCARv2_Chr1 | 5 | CH_dca_192 | 3 | 3 | 0.0000000610156 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 5 | CH_eca_685 | 2 | 2 | 0.000269233 |
| Eutrema salsugineum | scaffold_3 | 5 | CH_esa_456 | 2 | 2 | 0.000456899 |
| Magnolia biondii | Chr13 | 5 | CH_mbi_914 | 2 | 2 | 0.000145698 |
| Medicago truncatula | chr2 | 5 | CH_mtr_1163 | 2 | 2 | 0.000246518 |
| Prunus persica | Pp03 | 5 | CH_ppe_534 | 3 | 9 | 0.0000245188 |
| Pisum sativum | chr1LG6 | 5 | CH_psa_763 | 2 | 3 | 0.000938886 |
| Papaver somniferum | NC_039364.1 | 5 | CH_pso_279 | 4 | 8 | 0.00000000030252 |
| Quercus lobata | 8 | 5 | CH_qlo_1698 | 2 | 2 | 0.000516289 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_1433 | 2 | 3 | 0.000717541 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_1300 | 3 | 14 | 0.00000129543 |
| Tarenaya hassleriana | NW_010965372.1 | 5 | CH_tha_339 | 2 | 2 | 0.00069847 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 5 | CH_tpr_680 | 2 | 2 | 0.000454184 |
| Zea mays | 1 | 5 | CH_zma_489 | 2 | 2 | 0.000511313 |
| Brassica napus | A09 | 6 | CH_bna_637 | 3 | 5 | 0.00000188086 |
| Brassica oleracea | C9 | 6 | CH_bol_383 | 3 | 6 | 0.00000269165 |
| Capsella rubella | scaffold_6 | 6 | CH_cru_591 | 2 | 2 | 0.000438693 |
| Daucus carota | DCARv2_Chr1 | 6 | CH_dca_192 | 3 | 3 | 0.0000000610156 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 6 | CH_eca_685 | 2 | 2 | 0.000269233 |
| Eutrema salsugineum | scaffold_3 | 6 | CH_esa_456 | 2 | 2 | 0.000456899 |
| Magnolia biondii | Chr13 | 6 | CH_mbi_914 | 2 | 2 | 0.000145698 |
| Medicago truncatula | chr2 | 6 | CH_mtr_1163 | 2 | 2 | 0.000246518 |
| Prunus persica | Pp03 | 6 | CH_ppe_534 | 3 | 9 | 0.0000245188 |
| Pisum sativum | chr1LG6 | 6 | CH_psa_763 | 2 | 3 | 0.000938886 |
| Papaver somniferum | NC_039364.1 | 6 | CH_pso_279 | 4 | 8 | 0.00000000030252 |
| Quercus lobata | 8 | 6 | CH_qlo_1698 | 2 | 2 | 0.000516289 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_1433 | 2 | 3 | 0.000717541 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_1300 | 3 | 14 | 0.00000129543 |
| Tarenaya hassleriana | NW_010965372.1 | 6 | CH_tha_339 | 2 | 2 | 0.00069847 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 6 | CH_tpr_680 | 2 | 2 | 0.000454184 |
| Zea mays | 1 | 6 | CH_zma_489 | 2 | 2 | 0.000511313 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |