Functional clusters
Information
- Type InterPro
- Description Transcription factor, TCP
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica rapa | A02 | 5 | CH_bra_491 | 3 | 5 | 0.000316977 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 5 | CH_eca_188 | 4 | 4 | 0.00000000405251 |
| Magnolia biondii | Chr19 | 5 | CH_mbi_676 | 3 | 5 | 0.0000198029 |
| Physcomitrium patens | Chr03 | 5 | CH_ppa_109 | 3 | 10 | 0.0000135066 |
| Quercus lobata | 10 | 5 | CH_qlo_1304 | 3 | 5 | 0.0000531391 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_1441 | 3 | 4 | 0.00000797194 |
| Solanum tuberosum | ST4.03ch03 | 5 | CH_stu_520 | 3 | 3 | 0.0000177068 |
| Brassica rapa | A02 | 6 | CH_bra_491 | 3 | 5 | 0.000316977 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 6 | CH_eca_188 | 4 | 4 | 0.00000000405251 |
| Magnolia biondii | Chr19 | 6 | CH_mbi_676 | 3 | 5 | 0.0000198029 |
| Physcomitrium patens | Chr03 | 6 | CH_ppa_109 | 3 | 10 | 0.0000135066 |
| Quercus lobata | 10 | 6 | CH_qlo_1304 | 3 | 5 | 0.0000531391 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_1441 | 3 | 4 | 0.00000797194 |
| Solanum tuberosum | ST4.03ch03 | 6 | CH_stu_520 | 3 | 3 | 0.0000177068 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |