Functional clusters
Information
- Type InterPro
- Description Peptidase C50, separase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr6 | 5 | CH_acertr_490 | 3 | 19 | 0.0000288671 |
| Actinidia chinensis | Lachesis_group12 | 5 | CH_ach_342 | 2 | 2 | 0.000162964 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 5 | CH_amhyb_220 | 2 | 2 | 0.0000841751 |
| Aquilegia oxysepala | CHR03 | 5 | CH_aox_186 | 3 | 6 | 0.000000771692 |
| Amborella trichopoda | AmTr_v1.0_scaffold00001 | 5 | CH_atr_460 | 2 | 3 | 0.000238313 |
| Brassica carinata | ChrC02 | 5 | CH_bca_1891 | 2 | 2 | 0.00059854 |
| Brassica napus | C04 | 5 | CH_bna_29 | 7 | 11 | 6.83825e-21 |
| Cardamine hirsuta | Chr7 | 5 | CH_chi_316 | 3 | 3 | 0.000000602003 |
| Carica papaya | supercontig_148 | 5 | CH_cpa_112 | 3 | 4 | 0.0000000542253 |
| Cucumis sativus L. | chr6 | 5 | CH_csa_382 | 2 | 3 | 0.000250417 |
| Gossypium hirsutum | D01 | 5 | CH_ghi_1035 | 2 | 2 | 0.000267016 |
| Gossypium hirsutum | A01 | 5 | CH_ghi_393 | 3 | 3 | 0.0000000106947 |
| Lonicera japonica | GWHAAZE00000009 | 5 | CH_lonja_732 | 2 | 2 | 0.0000598874 |
| Malus domestica | Chr08 | 5 | CH_mdo_179 | 5 | 14 | 0.00000000000781842 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_1076 | 3 | 3 | 0.000000124594 |
| Sapria himalayana | scaffold60_3140063 | 5 | CH_shi_8 | 6 | 8 | 3.85192e-19 |
| Selenicereus undatus | Scaffold_33675 | 5 | CH_sun_328 | 2 | 2 | 0.000435983 |
| Utricularia gibba | unitig_26 | 5 | CH_ugi_131 | 2 | 2 | 0.0000820479 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_40 | 6 | 9 | 9.16822e-17 |
| Acer truncatum | chr6 | 6 | CH_acertr_490 | 3 | 19 | 0.0000288671 |
| Actinidia chinensis | Lachesis_group12 | 6 | CH_ach_342 | 2 | 2 | 0.000162964 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 6 | CH_amhyb_220 | 2 | 2 | 0.0000841751 |
| Aquilegia oxysepala | CHR03 | 6 | CH_aox_186 | 3 | 6 | 0.000000771692 |
| Amborella trichopoda | AmTr_v1.0_scaffold00001 | 6 | CH_atr_460 | 2 | 3 | 0.000238313 |
| Brassica carinata | ChrC02 | 6 | CH_bca_1891 | 2 | 2 | 0.00059854 |
| Brassica napus | C04 | 6 | CH_bna_29 | 7 | 11 | 6.83825e-21 |
| Cardamine hirsuta | Chr7 | 6 | CH_chi_316 | 3 | 3 | 0.000000602003 |
| Carica papaya | supercontig_148 | 6 | CH_cpa_112 | 3 | 4 | 0.0000000542253 |
| Cucumis sativus L. | chr6 | 6 | CH_csa_382 | 2 | 3 | 0.000250417 |
| Gossypium hirsutum | D01 | 6 | CH_ghi_1035 | 2 | 2 | 0.000267016 |
| Gossypium hirsutum | A01 | 6 | CH_ghi_393 | 3 | 3 | 0.0000000106947 |
| Lonicera japonica | GWHAAZE00000009 | 6 | CH_lonja_732 | 2 | 2 | 0.0000598874 |
| Malus domestica | Chr08 | 6 | CH_mdo_179 | 5 | 14 | 0.00000000000781842 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_1076 | 3 | 3 | 0.000000124594 |
| Sapria himalayana | scaffold60_3140063 | 6 | CH_shi_8 | 6 | 8 | 3.85192e-19 |
| Selenicereus undatus | Scaffold_33675 | 6 | CH_sun_328 | 2 | 2 | 0.000435983 |
| Utricularia gibba | unitig_26 | 6 | CH_ugi_131 | 2 | 2 | 0.0000820479 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_40 | 6 | 9 | 9.16822e-17 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |