Functional clusters

Information

  • Type InterPro
  • Description Ribosomal biogenesis, methyltransferase, EMG1/NEP1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 5 CH_arhy_663 3 5 0.00000221792
Camellia sinensis var. sinensis Chr10 5 CH_camsi_584 3 11 0.000000520324
Chenopodium quinoa C_Quinoa_Scaffold_3163 5 CH_cqu_483 3 4 0.00000296301
Durio zibethinus NW_019167937.1 5 CH_dzi_484 2 2 0.000278093
Glycine max Gm17 5 CH_gma_805 2 2 0.000379557
Lupinus albus Lalb_Chr02 5 CH_lal_396 2 2 0.0000524824
Lonicera japonica GWHAAZE00000001 5 CH_lonja_1154 2 2 0.000598874
Malus domestica Chr02 5 CH_mdo_1401 2 2 0.000796344
Malus domestica Chr03 5 CH_mdo_1402 2 2 0.000796344
Prunus persica Pp01 5 CH_ppe_339 3 4 0.000000133547
Rhododendron simsii chr09 5 CH_rsi_962 2 2 0.000645307
Salix brachista GWHAAZH00000016 5 CH_sbr_321 3 6 0.0000023818
Sechium edule LG02 5 CH_sed_451 2 2 0.000428052
Selenicereus undatus Scaffold_33678 5 CH_sun_271 2 2 0.000217992
Theobroma cacao Chromosome_7 5 CH_tca_374 3 4 0.00000112629
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 6 CH_arhy_663 3 5 0.00000221792
Camellia sinensis var. sinensis Chr10 6 CH_camsi_584 3 11 0.000000520324
Cucumis melo chr06 6 CH_cme_416 2 2 0.000400267
Chenopodium quinoa C_Quinoa_Scaffold_3163 6 CH_cqu_483 3 4 0.00000296301
Durio zibethinus NW_019167937.1 6 CH_dzi_484 2 2 0.000278093
Glycine max Gm17 6 CH_gma_805 2 2 0.000379557
Lupinus albus Lalb_Chr02 6 CH_lal_396 2 2 0.0000524824
Lonicera japonica GWHAAZE00000001 6 CH_lonja_1154 2 2 0.000598874
Malus domestica Chr02 6 CH_mdo_1401 2 2 0.000796344
Malus domestica Chr03 6 CH_mdo_1402 2 2 0.000796344
Prunus persica Pp01 6 CH_ppe_339 3 4 0.000000133547
Rhododendron simsii chr09 6 CH_rsi_962 2 2 0.000645307
Salix brachista GWHAAZH00000016 6 CH_sbr_321 3 6 0.0000023818
Sechium edule LG02 6 CH_sed_451 2 2 0.000428052
Selenicereus undatus Scaffold_33678 6 CH_sun_271 2 2 0.000217992
Theobroma cacao Chromosome_7 6 CH_tca_374 3 4 0.00000112629

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001