Functional clusters

Information

  • Type InterPro
  • Description Lysosomal cystine transporter

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00049 5 CH_atr_380 2 2 0.0000794407
Brassica carinata ChrB06 5 CH_bca_380 3 3 0.00000000685435
Cannabis sativa NC_044379.1 5 CH_cansat_229 3 8 0.000000362142
Corylus avellana 5 5 CH_cav_184 3 3 0.00000000881765
Carpinus fangiana Cfa03 5 CH_cfa_485 2 2 0.000227204
Carya illinoinensis Chr03 5 CH_cil_262 3 3 0.00000000576299
Carica papaya supercontig_130 5 CH_cpa_307 2 2 0.0000950661
Fragaria vesca Fvb6 5 CH_fve_122 5 14 0.00000000000379555
Glycine max Gm19 5 CH_gma_803 2 2 0.000379557
Glycine max Gm19 5 CH_gma_804 2 2 0.000379557
Lupinus albus Lalb_Chr14 5 CH_lal_685 2 2 0.000524824
Lupinus albus Lalb_Chr21 5 CH_lal_686 2 2 0.000524824
Lotus japonicus chr2 5 CH_lja_134 4 11 0.0000000253153
Lotus japonicus chr1 5 CH_lja_76 4 4 0.0000000000767936
Malus domestica Chr09 5 CH_mdo_1091 2 2 0.000227527
Malus domestica Chr17 5 CH_mdo_1362 2 3 0.000682551
Manihot esculenta Chromosome17 5 CH_mes_629 2 2 0.000366379
Manihot esculenta Chromosome15 5 CH_mes_630 2 2 0.000366379
Medicago truncatula chr6 5 CH_mtr_446 3 4 0.0000000101285
Punica granatum NC_045133.1 5 CH_pgr_416 2 2 0.0000750356
Prunus persica Pp03 5 CH_ppe_592 2 2 0.0000745962
Pisum sativum chr1LG6 5 CH_psa_138 4 10 0.00000000134088
Populus trichocarpa Chr17 5 CH_ptr_536 2 2 0.0000578001
Phaseolus vulgaris Chr04 5 CH_pvu_273 3 4 0.000000323876
Phaseolus vulgaris Chr08 5 CH_pvu_672 2 2 0.000734727
Quercus lobata 12 5 CH_qlo_1445 2 2 0.000154887
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_174 7 48 0.00000000000000271712
Simmondsia chinensis GWHAASQ00000003 5 CH_sci_133 3 4 0.000000173977
Selaginella moellendorffii scaffold_4 5 CH_smo_271 2 2 0.000280112
Trifolium pratense Tp57577_TGAC_v2_LG3 5 CH_tpr_758 2 2 0.000756974
Trifolium pratense Tp57577_TGAC_v2_LG6 5 CH_tpr_759 2 2 0.000756974
Vigna mungo CM024070.1 5 CH_vmu_570 2 3 0.000581496
Vitis vinifera chr14 5 CH_vvi_499 2 2 0.000076063
Amborella trichopoda AmTr_v1.0_scaffold00049 6 CH_atr_380 2 2 0.0000794407
Brassica carinata ChrB06 6 CH_bca_380 3 3 0.00000000685435
Cannabis sativa NC_044379.1 6 CH_cansat_229 3 8 0.000000362142
Corylus avellana 5 6 CH_cav_184 3 3 0.00000000881765
Carpinus fangiana Cfa03 6 CH_cfa_485 2 2 0.000227204
Carya illinoinensis Chr03 6 CH_cil_262 3 3 0.00000000576299
Cucumis melo chr06 6 CH_cme_445 2 3 0.000600367
Carica papaya supercontig_130 6 CH_cpa_307 2 2 0.0000950661
Fragaria x ananassa Fvb6-4 6 CH_fan_1162 2 2 0.00066613
Fragaria x ananassa Fvb6-3 6 CH_fan_427 3 6 0.000000862683
Fragaria x ananassa Fvb6-1 6 CH_fan_509 3 9 0.00000241527
Fragaria vesca Fvb6 6 CH_fve_122 5 14 0.00000000000379555
Glycine max Gm19 6 CH_gma_803 2 2 0.000379557
Glycine max Gm19 6 CH_gma_804 2 2 0.000379557
Lupinus albus Lalb_Chr14 6 CH_lal_685 2 2 0.000524824
Lupinus albus Lalb_Chr21 6 CH_lal_686 2 2 0.000524824
Lotus japonicus chr2 6 CH_lja_134 4 11 0.0000000253153
Lotus japonicus chr1 6 CH_lja_76 4 4 0.0000000000767936
Malus domestica Chr09 6 CH_mdo_1091 2 2 0.000227527
Malus domestica Chr17 6 CH_mdo_1362 2 3 0.000682551
Manihot esculenta Chromosome17 6 CH_mes_629 2 2 0.000366379
Manihot esculenta Chromosome15 6 CH_mes_630 2 2 0.000366379
Medicago truncatula chr6 6 CH_mtr_446 3 4 0.0000000101285
Punica granatum NC_045133.1 6 CH_pgr_416 2 2 0.0000750356
Prunus persica Pp03 6 CH_ppe_592 2 2 0.0000745962
Pisum sativum chr1LG6 6 CH_psa_138 4 10 0.00000000134088
Populus trichocarpa Chr17 6 CH_ptr_536 2 2 0.0000578001
Phaseolus vulgaris Chr04 6 CH_pvu_273 3 4 0.000000323876
Phaseolus vulgaris Chr08 6 CH_pvu_672 2 2 0.000734727
Quercus lobata 12 6 CH_qlo_1445 2 2 0.000154887
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_174 7 48 0.00000000000000271712
Simmondsia chinensis GWHAASQ00000003 6 CH_sci_133 3 4 0.000000173977
Selaginella moellendorffii scaffold_4 6 CH_smo_271 2 2 0.000280112
Trifolium pratense Tp57577_TGAC_v2_LG3 6 CH_tpr_758 2 2 0.000756974
Trifolium pratense Tp57577_TGAC_v2_LG6 6 CH_tpr_759 2 2 0.000756974
Vigna mungo CM024070.1 6 CH_vmu_570 2 3 0.000581496
Vitis vinifera chr14 6 CH_vvi_499 2 2 0.000076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001