Functional clusters

Information

  • Type InterPro
  • Description Putative pre-16S rRNA nuclease

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_816 2 2 0.000673083
Eucalyptus grandis Chr05 5 CH_egr_1321 2 3 0.000526721
Hydrangea macrophylla Hma1.2p1_0001F.1 5 CH_hma_635 2 2 0.000666519
Medicago truncatula chr2 5 CH_mtr_454 3 3 0.0000000101287
Physcomitrium patens Chr01 5 CH_ppa_347 2 3 0.000551426
Quercus lobata 12 5 CH_qlo_528 5 40 0.000000000210071
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_589 2 2 0.000278772
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_816 2 2 0.000673083
Eucalyptus grandis Chr05 6 CH_egr_1321 2 3 0.000526721
Hydrangea macrophylla Hma1.2p1_0001F.1 6 CH_hma_635 2 2 0.000666519
Medicago truncatula chr2 6 CH_mtr_454 3 3 0.0000000101287
Physcomitrium patens Chr01 6 CH_ppa_347 2 3 0.000551426
Quercus lobata 12 6 CH_qlo_528 5 40 0.000000000210071
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_589 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001