Functional clusters
Information
- Type InterPro
- Description Endo-1,3(4)-beta-glucanase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 5 | CH_arhy_11 | 15 | 15 | 2.10117e-47 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.04 | 5 | CH_arhy_18 | 13 | 14 | 3.83604e-39 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 5 | CH_bvu_192 | 3 | 3 | 0.000000205643 |
| Camellia sinensis var. sinensis | Chr1 | 5 | CH_camsi_709 | 3 | 12 | 0.00000277457 |
| Capsicum annuum | PGAv.1.6.scaffold497 | 5 | CH_can_686 | 2 | 2 | 0.000247831 |
| Cicer arietinum L. | Ca_LG5_v3 | 5 | CH_car_14 | 4 | 4 | 0.00000000000141454 |
| Corylus avellana | 5 | 5 | CH_cav_234 | 3 | 4 | 0.000000141073 |
| Carpinus fangiana | Cfa03 | 5 | CH_cfa_67 | 5 | 7 | 0.00000000000000518232 |
| Citrullus lanatus | CG_Chr11 | 5 | CH_cla_284 | 2 | 2 | 0.000266134 |
| Cucumis sativus L. | chr5 | 5 | CH_csa_400 | 2 | 2 | 0.000250428 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 5 | CH_eca_373 | 3 | 6 | 0.00000211367 |
| Eucalyptus grandis | Chr09 | 5 | CH_egr_177 | 6 | 8 | 4.32753e-19 |
| Glycine max | Gm08 | 5 | CH_gma_225 | 4 | 8 | 0.00000000241048 |
| Glycine max | Gm13 | 5 | CH_gma_353 | 3 | 3 | 0.000000259319 |
| Lupinus albus | Lalb_Chr02 | 5 | CH_lal_183 | 3 | 3 | 0.0000000826343 |
| Malus domestica | Chr09 | 5 | CH_mdo_206 | 4 | 4 | 0.0000000000343566 |
| Medicago truncatula | chr6 | 5 | CH_mtr_479 | 4 | 6 | 0.0000000228176 |
| Petunia axillaris | Peaxi162Scf01056 | 5 | CH_pax_538 | 2 | 2 | 0.000211067 |
| Pisum sativum | chr1LG6 | 5 | CH_psa_14 | 7 | 9 | 2.05666e-21 |
| Phaseolus vulgaris | Chr04 | 5 | CH_pvu_257 | 3 | 3 | 0.000000161953 |
| Phaseolus vulgaris | Chr08 | 5 | CH_pvu_258 | 3 | 3 | 0.000000161953 |
| Rhododendron simsii | chr10 | 5 | CH_rsi_668 | 2 | 2 | 0.0000645307 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_1648 | 2 | 2 | 0.0000487151 |
| Solanum lycopersicum | SL4.0ch02 | 5 | CH_sly_708 | 2 | 2 | 0.000176082 |
| Solanum pennellii | Spenn-ch02 | 5 | CH_spe_643 | 2 | 2 | 0.000133437 |
| Solanum tuberosum | ST4.03ch02 | 5 | CH_stu_705 | 2 | 2 | 0.000153736 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_204 | 5 | CH_tpr_9 | 8 | 8 | 4.04076e-26 |
| Vigna mungo | CM024070.1 | 5 | CH_vmu_190 | 3 | 3 | 0.00000035071 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 6 | CH_arhy_11 | 15 | 15 | 2.10117e-47 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.04 | 6 | CH_arhy_18 | 13 | 14 | 3.83604e-39 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 6 | CH_bvu_192 | 3 | 3 | 0.000000205643 |
| Camellia sinensis var. sinensis | Chr1 | 6 | CH_camsi_709 | 3 | 12 | 0.00000277457 |
| Capsicum annuum | PGAv.1.6.scaffold497 | 6 | CH_can_686 | 2 | 2 | 0.000247831 |
| Cicer arietinum L. | Ca_LG5_v3 | 6 | CH_car_14 | 4 | 4 | 0.00000000000141454 |
| Corylus avellana | 5 | 6 | CH_cav_234 | 3 | 4 | 0.000000141073 |
| Carpinus fangiana | Cfa03 | 6 | CH_cfa_67 | 5 | 7 | 0.00000000000000518232 |
| Citrullus lanatus | CG_Chr11 | 6 | CH_cla_284 | 2 | 2 | 0.000266134 |
| Cucumis melo | chr09 | 6 | CH_cme_363 | 2 | 2 | 0.000200133 |
| Cucumis sativus L. | chr5 | 6 | CH_csa_400 | 2 | 2 | 0.000250428 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 6 | CH_eca_373 | 3 | 6 | 0.00000211367 |
| Eucalyptus grandis | Chr09 | 6 | CH_egr_177 | 6 | 8 | 4.32753e-19 |
| Glycine max | Gm08 | 6 | CH_gma_225 | 4 | 8 | 0.00000000241048 |
| Glycine max | Gm13 | 6 | CH_gma_353 | 3 | 3 | 0.000000259319 |
| Lupinus albus | Lalb_Chr02 | 6 | CH_lal_183 | 3 | 3 | 0.0000000826343 |
| Malus domestica | Chr09 | 6 | CH_mdo_206 | 4 | 4 | 0.0000000000343566 |
| Medicago truncatula | chr6 | 6 | CH_mtr_479 | 4 | 6 | 0.0000000228176 |
| Petunia axillaris | Peaxi162Scf01056 | 6 | CH_pax_538 | 2 | 2 | 0.000211067 |
| Pisum sativum | chr1LG6 | 6 | CH_psa_14 | 7 | 9 | 2.05666e-21 |
| Phaseolus vulgaris | Chr04 | 6 | CH_pvu_257 | 3 | 3 | 0.000000161953 |
| Phaseolus vulgaris | Chr08 | 6 | CH_pvu_258 | 3 | 3 | 0.000000161953 |
| Rhododendron simsii | chr10 | 6 | CH_rsi_668 | 2 | 2 | 0.0000645307 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_1648 | 2 | 2 | 0.0000487151 |
| Solanum lycopersicum | SL4.0ch02 | 6 | CH_sly_708 | 2 | 2 | 0.000176082 |
| Solanum pennellii | Spenn-ch02 | 6 | CH_spe_643 | 2 | 2 | 0.000133437 |
| Solanum tuberosum | ST4.03ch02 | 6 | CH_stu_705 | 2 | 2 | 0.000153736 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_204 | 6 | CH_tpr_9 | 8 | 8 | 4.04076e-26 |
| Vigna mungo | CM024070.1 | 6 | CH_vmu_190 | 3 | 3 | 0.00000035071 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |