Functional clusters
Information
- Type InterPro
- Description Glycoside hydrolase, family 79
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR03 | 5 | CH_aox_414 | 2 | 2 | 0.000240597 |
| Amborella trichopoda | AmTr_v1.0_scaffold00110 | 5 | CH_atr_484 | 2 | 2 | 0.000238322 |
| Brassica carinata | ChrC06 | 5 | CH_bca_1702 | 3 | 54 | 0.000339429 |
| Camellia sinensis var. sinensis | Chr6 | 5 | CH_camsi_1541 | 2 | 2 | 0.000962949 |
| Corylus avellana | 4 | 5 | CH_cav_823 | 2 | 2 | 0.000766695 |
| Corylus avellana | 8 | 5 | CH_cav_824 | 2 | 2 | 0.000766695 |
| Coffea canephora | chr5 | 5 | CH_ccan_479 | 2 | 2 | 0.000119249 |
| Carya illinoinensis | Chr03 | 5 | CH_cil_217 | 4 | 5 | 0.000000000250027 |
| Carica papaya | supercontig_51 | 5 | CH_cpa_622 | 2 | 3 | 0.000855527 |
| Eucalyptus grandis | Chr03 | 5 | CH_egr_757 | 3 | 3 | 0.000000287747 |
| Gossypium hirsutum | A09 | 5 | CH_ghi_198 | 5 | 5 | 0.000000000000452787 |
| Gossypium hirsutum | A09 | 5 | CH_ghi_789 | 3 | 5 | 0.0000390572 |
| Gossypium raimondii | Chr06 | 5 | CH_gra_179 | 4 | 4 | 0.000000000841359 |
| Gossypium raimondii | Chr11 | 5 | CH_gra_469 | 3 | 8 | 0.000135007 |
| Magnolia biondii | Chr14 | 5 | CH_mbi_990 | 2 | 4 | 0.000291382 |
| Medicago truncatula | chr3 | 5 | CH_mtr_643 | 3 | 3 | 0.00000055708 |
| Medicago truncatula | chr4 | 5 | CH_mtr_738 | 3 | 4 | 0.00000222796 |
| Nelumbo nucifera | chr4 | 5 | CH_nnu_556 | 2 | 2 | 0.000481684 |
| Quercus lobata | 10 | 5 | CH_qlo_1775 | 2 | 2 | 0.000774433 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_1131 | 3 | 3 | 0.000000199351 |
| Vanilla planifolia | CM028157.1 | 5 | CH_vpl_26 | 7 | 18 | 0.0000000000000013963 |
| Aquilegia oxysepala | CHR03 | 6 | CH_aox_414 | 2 | 2 | 0.000240597 |
| Amborella trichopoda | AmTr_v1.0_scaffold00110 | 6 | CH_atr_484 | 2 | 2 | 0.000238322 |
| Brassica carinata | ChrC06 | 6 | CH_bca_1702 | 3 | 54 | 0.000339429 |
| Camellia sinensis var. sinensis | Chr6 | 6 | CH_camsi_1541 | 2 | 2 | 0.000962949 |
| Corylus avellana | 4 | 6 | CH_cav_823 | 2 | 2 | 0.000766695 |
| Corylus avellana | 8 | 6 | CH_cav_824 | 2 | 2 | 0.000766695 |
| Coffea canephora | chr5 | 6 | CH_ccan_479 | 2 | 2 | 0.000119249 |
| Carya illinoinensis | Chr03 | 6 | CH_cil_217 | 4 | 5 | 0.000000000250027 |
| Carica papaya | supercontig_51 | 6 | CH_cpa_622 | 2 | 3 | 0.000855527 |
| Eucalyptus grandis | Chr03 | 6 | CH_egr_757 | 3 | 3 | 0.000000287747 |
| Gossypium hirsutum | A09 | 6 | CH_ghi_198 | 5 | 5 | 0.000000000000452787 |
| Gossypium hirsutum | A09 | 6 | CH_ghi_789 | 3 | 5 | 0.0000390572 |
| Gossypium raimondii | Chr06 | 6 | CH_gra_179 | 4 | 4 | 0.000000000841359 |
| Gossypium raimondii | Chr11 | 6 | CH_gra_469 | 3 | 8 | 0.000135007 |
| Magnolia biondii | Chr14 | 6 | CH_mbi_990 | 2 | 4 | 0.000291382 |
| Medicago truncatula | chr3 | 6 | CH_mtr_643 | 3 | 3 | 0.00000055708 |
| Medicago truncatula | chr4 | 6 | CH_mtr_738 | 3 | 4 | 0.00000222796 |
| Nelumbo nucifera | chr4 | 6 | CH_nnu_556 | 2 | 2 | 0.000481684 |
| Quercus lobata | 10 | 6 | CH_qlo_1775 | 2 | 2 | 0.000774433 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_1131 | 3 | 3 | 0.000000199351 |
| Vanilla planifolia | CM028157.1 | 6 | CH_vpl_26 | 7 | 18 | 0.0000000000000013963 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |