Functional clusters
Information
- Type InterPro
- Description NADPH-dependent FMN reductase-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 5 | CH_arhy_709 | 3 | 3 | 0.00000491271 |
| Cannabis sativa | NC_044371.1 | 5 | CH_cansat_581 | 2 | 2 | 0.000656642 |
| Capsicum annuum | PGAv.1.6.scaffold1045 | 5 | CH_can_265 | 4 | 9 | 0.0000000268271 |
| Chara braunii | BFEA01000145 | 5 | CH_cbr_173 | 2 | 2 | 0.0000719269 |
| Carya illinoinensis | Chr13 | 5 | CH_cil_412 | 3 | 3 | 0.00000126786 |
| Chlamydomonas reinhardtii | chromosome_10 | 5 | CH_cre_35 | 3 | 4 | 0.0000000776116 |
| Capsella rubella | scaffold_5 | 5 | CH_cru_261 | 3 | 3 | 0.000000280668 |
| Gossypium hirsutum | D04 | 5 | CH_ghi_688 | 3 | 4 | 0.00000757454 |
| Malus domestica | Chr02 | 5 | CH_mdo_774 | 3 | 8 | 0.000019918 |
| Manihot esculenta | Chromosome04 | 5 | CH_mes_201 | 4 | 4 | 0.000000000488432 |
| Medicago truncatula | chr3 | 5 | CH_mtr_321 | 4 | 4 | 0.000000000103002 |
| Nicotiana tabacum | Nitab4.5_0000307 | 5 | CH_nta_257 | 2 | 2 | 0.000329182 |
| Prunus persica | Pp02 | 5 | CH_ppe_239 | 4 | 5 | 0.000000000784477 |
| Quercus lobata | 4 | 5 | CH_qlo_65 | 11 | 22 | 1.17648e-28 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_853 | 3 | 7 | 0.0000100074 |
| Rhododendron simsii | chr02 | 5 | CH_rsi_336 | 4 | 8 | 0.0000000118428 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 6 | CH_arhy_709 | 3 | 3 | 0.00000491271 |
| Cannabis sativa | NC_044371.1 | 6 | CH_cansat_581 | 2 | 2 | 0.000656642 |
| Capsicum annuum | PGAv.1.6.scaffold1045 | 6 | CH_can_265 | 4 | 9 | 0.0000000268271 |
| Chara braunii | BFEA01000145 | 6 | CH_cbr_173 | 2 | 2 | 0.0000719269 |
| Carya illinoinensis | Chr13 | 6 | CH_cil_412 | 3 | 3 | 0.00000126786 |
| Chlamydomonas reinhardtii | chromosome_10 | 6 | CH_cre_35 | 3 | 4 | 0.0000000776116 |
| Capsella rubella | scaffold_5 | 6 | CH_cru_261 | 3 | 3 | 0.000000280668 |
| Gossypium hirsutum | D04 | 6 | CH_ghi_688 | 3 | 4 | 0.00000757454 |
| Malus domestica | Chr02 | 6 | CH_mdo_774 | 3 | 8 | 0.000019918 |
| Manihot esculenta | Chromosome04 | 6 | CH_mes_201 | 4 | 4 | 0.000000000488432 |
| Medicago truncatula | chr3 | 6 | CH_mtr_321 | 4 | 4 | 0.000000000103002 |
| Nicotiana tabacum | Nitab4.5_0000307 | 6 | CH_nta_257 | 2 | 2 | 0.000329182 |
| Prunus persica | Pp02 | 6 | CH_ppe_239 | 4 | 5 | 0.000000000784477 |
| Quercus lobata | 4 | 6 | CH_qlo_65 | 11 | 22 | 1.17648e-28 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_853 | 3 | 7 | 0.0000100074 |
| Rhododendron simsii | chr02 | 6 | CH_rsi_336 | 4 | 8 | 0.0000000118428 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |