Functional clusters
Information
- Type InterPro
- Description Snf7 family
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica napus | C04 | 5 | CH_bna_1060 | 3 | 4 | 0.000103553 |
| Brassica napus | C09 | 5 | CH_bna_686 | 4 | 10 | 0.00000327167 |
| Eucalyptus grandis | Chr03 | 5 | CH_egr_615 | 4 | 6 | 0.0000000123087 |
| Lotus japonicus | chr4 | 5 | CH_lja_358 | 4 | 28 | 0.0000304039 |
| Papaver somniferum | NC_039359.1 | 5 | CH_pso_756 | 3 | 4 | 0.0000166117 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_805 | 3 | 4 | 0.00000433784 |
| Sequoiadendron giganteum | HRSCAF_1 | 5 | CH_sgi_1356 | 3 | 3 | 0.00000242069 |
| Brassica napus | C04 | 6 | CH_bna_1060 | 3 | 4 | 0.000103553 |
| Brassica napus | C09 | 6 | CH_bna_686 | 4 | 10 | 0.00000327167 |
| Eucalyptus grandis | Chr03 | 6 | CH_egr_615 | 4 | 6 | 0.0000000123087 |
| Lotus japonicus | chr4 | 6 | CH_lja_358 | 4 | 28 | 0.0000304039 |
| Papaver somniferum | NC_039359.1 | 6 | CH_pso_756 | 3 | 4 | 0.0000166117 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_805 | 3 | 4 | 0.00000433784 |
| Sequoiadendron giganteum | HRSCAF_1 | 6 | CH_sgi_1356 | 3 | 3 | 0.00000242069 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |