Functional clusters
Information
- Type InterPro
- Description DOMON domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-5 | 5 | CH_aar_415 | 3 | 19 | 0.000675175 |
| Actinidia chinensis | Lachesis_group1 | 5 | CH_ach_425 | 3 | 9 | 0.000302792 |
| Brassica carinata | ChrB04 | 5 | CH_bca_1700 | 3 | 10 | 0.000333413 |
| Brassica carinata | ChrC01 | 5 | CH_bca_2065 | 3 | 13 | 0.000794094 |
| Brassica carinata | ChrC07 | 5 | CH_bca_690 | 4 | 13 | 0.000000573014 |
| Brassica oleracea | C1 | 5 | CH_bol_649 | 3 | 10 | 0.000186074 |
| Brassica oleracea | C3 | 5 | CH_bol_808 | 3 | 14 | 0.000563944 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 5 | CH_bvu_293 | 3 | 5 | 0.0000123322 |
| Camellia sinensis var. sinensis | Chr4 | 5 | CH_camsi_799 | 3 | 4 | 0.000010292 |
| Cicer arietinum L. | Ca_LG1_v3 | 5 | CH_car_120 | 3 | 3 | 0.00000199906 |
| Corylus avellana | 5 | 5 | CH_cav_76 | 6 | 11 | 0.000000000000137652 |
| Citrus clementina | scaffold_2 | 5 | CH_ccl_501 | 3 | 6 | 0.0000734012 |
| Carpinus fangiana | Cfa06 | 5 | CH_cfa_66 | 6 | 8 | 0.00000000000000471275 |
| Carya illinoinensis | Chr13 | 5 | CH_cil_432 | 3 | 3 | 0.00000209773 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3458 | 5 | CH_cqu_593 | 3 | 5 | 0.0000228877 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 5 | CH_eca_151 | 4 | 4 | 0.000000000645149 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_526 | 4 | 4 | 0.000000000821052 |
| Erythranthe guttata | scaffold_14 | 5 | CH_egut_198 | 6 | 37 | 0.00000000196314 |
| Helianthus annuus | HanXRQChr11 | 5 | CH_han_615 | 3 | 3 | 0.00000344952 |
| Hydrangea macrophylla | Hma1.2p1_0405F.1 | 5 | CH_hma_200 | 3 | 3 | 0.00000305437 |
| Hydrangea macrophylla | Hma1.2p1_0133F.1 | 5 | CH_hma_223 | 3 | 4 | 0.0000122127 |
| Lupinus albus | Lalb_Chr03 | 5 | CH_lal_284 | 3 | 3 | 0.00000231376 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_533 | 3 | 3 | 0.00000118358 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_598 | 3 | 4 | 0.00000473323 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 5 | CH_lsa_561 | 3 | 4 | 0.0000210761 |
| Magnolia biondii | Chr07 | 5 | CH_mbi_400 | 4 | 11 | 0.000000113354 |
| Manihot esculenta | Chromosome12 | 5 | CH_mes_134 | 6 | 7 | 0.000000000000484139 |
| Manihot esculenta | Chromosome13 | 5 | CH_mes_261 | 4 | 4 | 0.000000024565 |
| Manihot esculenta | Chromosome12 | 5 | CH_mes_38 | 10 | 10 | 5.40285e-27 |
| Manihot esculenta | Chromosome12 | 5 | CH_mes_458 | 3 | 3 | 0.0000277424 |
| Nelumbo nucifera | chr7 | 5 | CH_nnu_335 | 3 | 4 | 0.0000185091 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_34 | 6 | 6 | 3.16672e-16 |
| Oryza sativa ssp. japonica | chr03 | 5 | CH_osa_539 | 3 | 7 | 0.0000994538 |
| Oryza sativa ssp. japonica | chr01 | 5 | CH_osa_767 | 3 | 13 | 0.0008112 |
| Prunus persica | Pp08 | 5 | CH_ppe_429 | 3 | 3 | 0.0000023873 |
| Papaver somniferum | NC_039363.1 | 5 | CH_pso_692 | 3 | 4 | 0.00000539256 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_802 | 3 | 6 | 0.0000269531 |
| Populus trichocarpa | Chr14 | 5 | CH_ptr_508 | 3 | 4 | 0.0000308568 |
| Quercus lobata | 9 | 5 | CH_qlo_1011 | 3 | 3 | 0.00000271892 |
| Quercus lobata | 8 | 5 | CH_qlo_1743 | 3 | 12 | 0.000596567 |
| Quercus lobata | 8 | 5 | CH_qlo_681 | 4 | 6 | 0.0000000147315 |
| Rhododendron simsii | chr02 | 5 | CH_rsi_132 | 9 | 44 | 0.00000000000000139023 |
| Rhododendron simsii | chr02 | 5 | CH_rsi_232 | 8 | 72 | 0.0000000000376142 |
| Rhododendron simsii | chr06 | 5 | CH_rsi_709 | 3 | 4 | 0.0000730395 |
| Salix brachista | GWHAAZH00000014 | 5 | CH_sbr_401 | 3 | 4 | 0.0000161953 |
| Sechium edule | LG07 | 5 | CH_sed_236 | 3 | 3 | 0.00000347383 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_849 | 4 | 8 | 0.00000000509585 |
| Solanum lycopersicum | SL4.0ch07 | 5 | CH_sly_414 | 3 | 3 | 0.00000235128 |
| Solanum pennellii | Spenn-ch07 | 5 | CH_spe_362 | 3 | 3 | 0.00000135028 |
| Tripterygium wilfordii | NC_052253.1 | 5 | CH_twi_475 | 4 | 61 | 0.000485524 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_307 | 3 | 3 | 0.00000370452 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_383 | 3 | 5 | 0.0000370159 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_385 | 4 | 29 | 0.000040496 |
| Aethionema arabicum | LG-5 | 6 | CH_aar_415 | 3 | 19 | 0.000675175 |
| Actinidia chinensis | Lachesis_group1 | 6 | CH_ach_425 | 3 | 9 | 0.000302792 |
| Brassica carinata | ChrB04 | 6 | CH_bca_1700 | 3 | 10 | 0.000333413 |
| Brassica carinata | ChrC01 | 6 | CH_bca_2065 | 3 | 13 | 0.000794094 |
| Brassica carinata | ChrC07 | 6 | CH_bca_690 | 4 | 13 | 0.000000573014 |
| Brassica oleracea | C1 | 6 | CH_bol_649 | 3 | 10 | 0.000186074 |
| Brassica oleracea | C3 | 6 | CH_bol_808 | 3 | 14 | 0.000563944 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 6 | CH_bvu_293 | 3 | 5 | 0.0000123322 |
| Camellia sinensis var. sinensis | Chr4 | 6 | CH_camsi_799 | 3 | 4 | 0.000010292 |
| Cicer arietinum L. | Ca_LG1_v3 | 6 | CH_car_120 | 3 | 3 | 0.00000199906 |
| Corylus avellana | 5 | 6 | CH_cav_76 | 6 | 11 | 0.000000000000137652 |
| Citrus clementina | scaffold_2 | 6 | CH_ccl_501 | 3 | 6 | 0.0000734012 |
| Carpinus fangiana | Cfa06 | 6 | CH_cfa_66 | 6 | 8 | 0.00000000000000471275 |
| Carya illinoinensis | Chr13 | 6 | CH_cil_432 | 3 | 3 | 0.00000209773 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3458 | 6 | CH_cqu_593 | 3 | 5 | 0.0000228877 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 6 | CH_eca_151 | 4 | 4 | 0.000000000645149 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_526 | 4 | 4 | 0.000000000821052 |
| Erythranthe guttata | scaffold_14 | 6 | CH_egut_198 | 6 | 37 | 0.00000000196314 |
| Helianthus annuus | HanXRQChr11 | 6 | CH_han_615 | 3 | 3 | 0.00000344952 |
| Hydrangea macrophylla | Hma1.2p1_0405F.1 | 6 | CH_hma_200 | 3 | 3 | 0.00000305437 |
| Hydrangea macrophylla | Hma1.2p1_0133F.1 | 6 | CH_hma_223 | 3 | 4 | 0.0000122127 |
| Lupinus albus | Lalb_Chr03 | 6 | CH_lal_284 | 3 | 3 | 0.00000231376 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_533 | 3 | 3 | 0.00000118358 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_598 | 3 | 4 | 0.00000473323 |
| Lactuca sativa | Lsat_1_v8_lg_7 | 6 | CH_lsa_561 | 3 | 4 | 0.0000210761 |
| Magnolia biondii | Chr07 | 6 | CH_mbi_400 | 4 | 11 | 0.000000113354 |
| Manihot esculenta | Chromosome12 | 6 | CH_mes_134 | 6 | 7 | 0.000000000000484139 |
| Manihot esculenta | Chromosome13 | 6 | CH_mes_261 | 4 | 4 | 0.000000024565 |
| Manihot esculenta | Chromosome12 | 6 | CH_mes_38 | 10 | 10 | 5.40285e-27 |
| Manihot esculenta | Chromosome12 | 6 | CH_mes_458 | 3 | 3 | 0.0000277424 |
| Nelumbo nucifera | chr7 | 6 | CH_nnu_335 | 3 | 4 | 0.0000185091 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_34 | 6 | 6 | 3.16672e-16 |
| Oryza sativa ssp. japonica | chr03 | 6 | CH_osa_539 | 3 | 7 | 0.0000994538 |
| Oryza sativa ssp. japonica | chr01 | 6 | CH_osa_767 | 3 | 13 | 0.0008112 |
| Prunus persica | Pp08 | 6 | CH_ppe_429 | 3 | 3 | 0.0000023873 |
| Papaver somniferum | NC_039363.1 | 6 | CH_pso_692 | 3 | 4 | 0.00000539256 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_802 | 3 | 6 | 0.0000269531 |
| Populus trichocarpa | Chr14 | 6 | CH_ptr_508 | 3 | 4 | 0.0000308568 |
| Quercus lobata | 9 | 6 | CH_qlo_1011 | 3 | 3 | 0.00000271892 |
| Quercus lobata | 8 | 6 | CH_qlo_1743 | 3 | 12 | 0.000596567 |
| Quercus lobata | 8 | 6 | CH_qlo_681 | 4 | 6 | 0.0000000147315 |
| Rhododendron simsii | chr02 | 6 | CH_rsi_132 | 9 | 44 | 0.00000000000000139023 |
| Rhododendron simsii | chr02 | 6 | CH_rsi_232 | 8 | 72 | 0.0000000000376142 |
| Rhododendron simsii | chr06 | 6 | CH_rsi_709 | 3 | 4 | 0.0000730395 |
| Salix brachista | GWHAAZH00000014 | 6 | CH_sbr_401 | 3 | 4 | 0.0000161953 |
| Sechium edule | LG07 | 6 | CH_sed_236 | 3 | 3 | 0.00000347383 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_849 | 4 | 8 | 0.00000000509585 |
| Solanum lycopersicum | SL4.0ch07 | 6 | CH_sly_414 | 3 | 3 | 0.00000235128 |
| Solanum pennellii | Spenn-ch07 | 6 | CH_spe_362 | 3 | 3 | 0.00000135028 |
| Tripterygium wilfordii | NC_052253.1 | 6 | CH_twi_475 | 4 | 61 | 0.000485524 |
| Vaccinium macrocarpon | chr7_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_307 | 3 | 3 | 0.00000370452 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_383 | 3 | 5 | 0.0000370159 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_385 | 4 | 29 | 0.000040496 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |