Functional clusters

Information

  • Type InterPro
  • Description DOMON domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-5 5 CH_aar_415 3 19 0.000675175
Actinidia chinensis Lachesis_group1 5 CH_ach_425 3 9 0.000302792
Brassica carinata ChrB04 5 CH_bca_1700 3 10 0.000333413
Brassica carinata ChrC01 5 CH_bca_2065 3 13 0.000794094
Brassica carinata ChrC07 5 CH_bca_690 4 13 0.000000573014
Brassica oleracea C1 5 CH_bol_649 3 10 0.000186074
Brassica oleracea C3 5 CH_bol_808 3 14 0.000563944
Beta vulgaris Chr9_EL10_PGA_scaffold8 5 CH_bvu_293 3 5 0.0000123322
Camellia sinensis var. sinensis Chr4 5 CH_camsi_799 3 4 0.000010292
Cicer arietinum L. Ca_LG1_v3 5 CH_car_120 3 3 0.00000199906
Corylus avellana 5 5 CH_cav_76 6 11 0.000000000000137652
Citrus clementina scaffold_2 5 CH_ccl_501 3 6 0.0000734012
Carpinus fangiana Cfa06 5 CH_cfa_66 6 8 0.00000000000000471275
Carya illinoinensis Chr13 5 CH_cil_432 3 3 0.00000209773
Chenopodium quinoa C_Quinoa_Scaffold_3458 5 CH_cqu_593 3 5 0.0000228877
Erigeron canadensis Conyza_canadensis_scaffold:3 5 CH_eca_151 4 4 0.000000000645149
Eucalyptus grandis Chr08 5 CH_egr_526 4 4 0.000000000821052
Erythranthe guttata scaffold_14 5 CH_egut_198 6 37 0.00000000196314
Helianthus annuus HanXRQChr11 5 CH_han_615 3 3 0.00000344952
Hydrangea macrophylla Hma1.2p1_0405F.1 5 CH_hma_200 3 3 0.00000305437
Hydrangea macrophylla Hma1.2p1_0133F.1 5 CH_hma_223 3 4 0.0000122127
Lupinus albus Lalb_Chr03 5 CH_lal_284 3 3 0.00000231376
Lonicera japonica GWHAAZE00000002 5 CH_lonja_533 3 3 0.00000118358
Lonicera japonica GWHAAZE00000001 5 CH_lonja_598 3 4 0.00000473323
Lactuca sativa Lsat_1_v8_lg_7 5 CH_lsa_561 3 4 0.0000210761
Magnolia biondii Chr07 5 CH_mbi_400 4 11 0.000000113354
Manihot esculenta Chromosome12 5 CH_mes_134 6 7 0.000000000000484139
Manihot esculenta Chromosome13 5 CH_mes_261 4 4 0.000000024565
Manihot esculenta Chromosome12 5 CH_mes_38 10 10 5.40285e-27
Manihot esculenta Chromosome12 5 CH_mes_458 3 3 0.0000277424
Nelumbo nucifera chr7 5 CH_nnu_335 3 4 0.0000185091
Nelumbo nucifera chr1 5 CH_nnu_34 6 6 3.16672e-16
Oryza sativa ssp. japonica chr03 5 CH_osa_539 3 7 0.0000994538
Oryza sativa ssp. japonica chr01 5 CH_osa_767 3 13 0.0008112
Prunus persica Pp08 5 CH_ppe_429 3 3 0.0000023873
Papaver somniferum NC_039363.1 5 CH_pso_692 3 4 0.00000539256
Papaver somniferum NC_039358.1 5 CH_pso_802 3 6 0.0000269531
Populus trichocarpa Chr14 5 CH_ptr_508 3 4 0.0000308568
Quercus lobata 9 5 CH_qlo_1011 3 3 0.00000271892
Quercus lobata 8 5 CH_qlo_1743 3 12 0.000596567
Quercus lobata 8 5 CH_qlo_681 4 6 0.0000000147315
Rhododendron simsii chr02 5 CH_rsi_132 9 44 0.00000000000000139023
Rhododendron simsii chr02 5 CH_rsi_232 8 72 0.0000000000376142
Rhododendron simsii chr06 5 CH_rsi_709 3 4 0.0000730395
Salix brachista GWHAAZH00000014 5 CH_sbr_401 3 4 0.0000161953
Sechium edule LG07 5 CH_sed_236 3 3 0.00000347383
Sequoiadendron giganteum chr8 5 CH_sgi_849 4 8 0.00000000509585
Solanum lycopersicum SL4.0ch07 5 CH_sly_414 3 3 0.00000235128
Solanum pennellii Spenn-ch07 5 CH_spe_362 3 3 0.00000135028
Tripterygium wilfordii NC_052253.1 5 CH_twi_475 4 61 0.000485524
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_307 3 3 0.00000370452
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_383 3 5 0.0000370159
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_385 4 29 0.000040496
Aethionema arabicum LG-5 6 CH_aar_415 3 19 0.000675175
Actinidia chinensis Lachesis_group1 6 CH_ach_425 3 9 0.000302792
Brassica carinata ChrB04 6 CH_bca_1700 3 10 0.000333413
Brassica carinata ChrC01 6 CH_bca_2065 3 13 0.000794094
Brassica carinata ChrC07 6 CH_bca_690 4 13 0.000000573014
Brassica oleracea C1 6 CH_bol_649 3 10 0.000186074
Brassica oleracea C3 6 CH_bol_808 3 14 0.000563944
Beta vulgaris Chr9_EL10_PGA_scaffold8 6 CH_bvu_293 3 5 0.0000123322
Camellia sinensis var. sinensis Chr4 6 CH_camsi_799 3 4 0.000010292
Cicer arietinum L. Ca_LG1_v3 6 CH_car_120 3 3 0.00000199906
Corylus avellana 5 6 CH_cav_76 6 11 0.000000000000137652
Citrus clementina scaffold_2 6 CH_ccl_501 3 6 0.0000734012
Carpinus fangiana Cfa06 6 CH_cfa_66 6 8 0.00000000000000471275
Carya illinoinensis Chr13 6 CH_cil_432 3 3 0.00000209773
Chenopodium quinoa C_Quinoa_Scaffold_3458 6 CH_cqu_593 3 5 0.0000228877
Erigeron canadensis Conyza_canadensis_scaffold:3 6 CH_eca_151 4 4 0.000000000645149
Eucalyptus grandis Chr08 6 CH_egr_526 4 4 0.000000000821052
Erythranthe guttata scaffold_14 6 CH_egut_198 6 37 0.00000000196314
Helianthus annuus HanXRQChr11 6 CH_han_615 3 3 0.00000344952
Hydrangea macrophylla Hma1.2p1_0405F.1 6 CH_hma_200 3 3 0.00000305437
Hydrangea macrophylla Hma1.2p1_0133F.1 6 CH_hma_223 3 4 0.0000122127
Lupinus albus Lalb_Chr03 6 CH_lal_284 3 3 0.00000231376
Lonicera japonica GWHAAZE00000002 6 CH_lonja_533 3 3 0.00000118358
Lonicera japonica GWHAAZE00000001 6 CH_lonja_598 3 4 0.00000473323
Lactuca sativa Lsat_1_v8_lg_7 6 CH_lsa_561 3 4 0.0000210761
Magnolia biondii Chr07 6 CH_mbi_400 4 11 0.000000113354
Manihot esculenta Chromosome12 6 CH_mes_134 6 7 0.000000000000484139
Manihot esculenta Chromosome13 6 CH_mes_261 4 4 0.000000024565
Manihot esculenta Chromosome12 6 CH_mes_38 10 10 5.40285e-27
Manihot esculenta Chromosome12 6 CH_mes_458 3 3 0.0000277424
Nelumbo nucifera chr7 6 CH_nnu_335 3 4 0.0000185091
Nelumbo nucifera chr1 6 CH_nnu_34 6 6 3.16672e-16
Oryza sativa ssp. japonica chr03 6 CH_osa_539 3 7 0.0000994538
Oryza sativa ssp. japonica chr01 6 CH_osa_767 3 13 0.0008112
Prunus persica Pp08 6 CH_ppe_429 3 3 0.0000023873
Papaver somniferum NC_039363.1 6 CH_pso_692 3 4 0.00000539256
Papaver somniferum NC_039358.1 6 CH_pso_802 3 6 0.0000269531
Populus trichocarpa Chr14 6 CH_ptr_508 3 4 0.0000308568
Quercus lobata 9 6 CH_qlo_1011 3 3 0.00000271892
Quercus lobata 8 6 CH_qlo_1743 3 12 0.000596567
Quercus lobata 8 6 CH_qlo_681 4 6 0.0000000147315
Rhododendron simsii chr02 6 CH_rsi_132 9 44 0.00000000000000139023
Rhododendron simsii chr02 6 CH_rsi_232 8 72 0.0000000000376142
Rhododendron simsii chr06 6 CH_rsi_709 3 4 0.0000730395
Salix brachista GWHAAZH00000014 6 CH_sbr_401 3 4 0.0000161953
Sechium edule LG07 6 CH_sed_236 3 3 0.00000347383
Sequoiadendron giganteum chr8 6 CH_sgi_849 4 8 0.00000000509585
Solanum lycopersicum SL4.0ch07 6 CH_sly_414 3 3 0.00000235128
Solanum pennellii Spenn-ch07 6 CH_spe_362 3 3 0.00000135028
Tripterygium wilfordii NC_052253.1 6 CH_twi_475 4 61 0.000485524
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_307 3 3 0.00000370452
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_383 3 5 0.0000370159
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_385 4 29 0.000040496

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001