Functional clusters

Information

  • Type InterPro
  • Description HpcH/HpaI aldolase/citrate lyase domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-6 5 CH_aar_336 2 2 0.000273698
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 5 CH_amhyb_219 2 2 0.0000841751
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 5 CH_arhy_550 3 3 0.00000038452
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 5 CH_arhy_551 3 3 0.00000038452
Brassica carinata ChrC09 5 CH_bca_1567 2 2 0.000213764
Brassica napus A01 5 CH_bna_1221 2 2 0.000278425
Brassica napus C01 5 CH_bna_1222 2 2 0.000278425
Brassica oleracea C1 5 CH_bol_600 2 2 0.0000980584
Brassica rapa A01 5 CH_bra_395 2 2 0.000128794
Beta vulgaris Chr5_EL10_PGA_scaffold2 5 CH_bvu_404 2 2 0.000248365
Camellia sinensis var. sinensis Chr12 5 CH_camsi_1520 2 7 0.000962839
Corylus avellana 5 5 CH_cav_722 2 2 0.000460017
Cardamine hirsuta Chr1 5 CH_chi_704 2 2 0.000414723
Corchorus olitorius AWUE01014581.1 5 CH_col_57 3 3 0.000000128001
Chenopodium quinoa C_Quinoa_Scaffold_1971 5 CH_cqu_835 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_1480 5 CH_cqu_836 2 2 0.000284293
Eutrema salsugineum scaffold_1 5 CH_esa_455 2 2 0.000456899
Olea europaea chr22 5 CH_oeu_320 2 2 0.0000533789
Quercus lobata CM012294 5 CH_qlo_428 4 6 0.00000000000619301
Simmondsia chinensis GWHAASQ00000001 5 CH_sci_387 2 2 0.000255428
Theobroma cacao Chromosome_3 5 CH_tca_525 2 2 0.0000732386
Aethionema arabicum LG-6 6 CH_aar_336 2 2 0.000273698
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 6 CH_amhyb_219 2 2 0.0000841751
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 6 CH_arhy_550 3 3 0.00000038452
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 6 CH_arhy_551 3 3 0.00000038452
Brassica carinata ChrC09 6 CH_bca_1567 2 2 0.000213764
Brassica napus A01 6 CH_bna_1221 2 2 0.000278425
Brassica napus C01 6 CH_bna_1222 2 2 0.000278425
Brassica oleracea C1 6 CH_bol_600 2 2 0.0000980584
Brassica rapa A01 6 CH_bra_395 2 2 0.000128794
Beta vulgaris Chr5_EL10_PGA_scaffold2 6 CH_bvu_404 2 2 0.000248365
Camellia sinensis var. sinensis Chr12 6 CH_camsi_1520 2 7 0.000962839
Corylus avellana 5 6 CH_cav_722 2 2 0.000460017
Cardamine hirsuta Chr1 6 CH_chi_704 2 2 0.000414723
Corchorus olitorius AWUE01014581.1 6 CH_col_57 3 3 0.000000128001
Chenopodium quinoa C_Quinoa_Scaffold_1971 6 CH_cqu_835 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_1480 6 CH_cqu_836 2 2 0.000284293
Eutrema salsugineum scaffold_1 6 CH_esa_455 2 2 0.000456899
Fragaria x ananassa Fvb5-1 6 CH_fan_772 2 2 0.0000555108
Olea europaea chr22 6 CH_oeu_320 2 2 0.0000533789
Quercus lobata CM012294 6 CH_qlo_428 4 6 0.00000000000619301
Simmondsia chinensis GWHAASQ00000001 6 CH_sci_387 2 2 0.000255428
Theobroma cacao Chromosome_3 6 CH_tca_525 2 2 0.0000732386

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001