Functional clusters

Information

  • Type InterPro
  • Description Nucleoporin, Nup155-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_1 5 CH_aly_676 2 2 0.000660044
Ceratophyllum demersum 4 5 CH_cde_402 2 2 0.000473878
Ceratophyllum demersum 5 5 CH_cde_403 2 2 0.000473878
Erigeron canadensis Conyza_canadensis_scaffold:7 5 CH_eca_627 2 2 0.000134617
Malus domestica Chr16 5 CH_mdo_410 3 4 0.0000000345119
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1111 2 2 0.000119596
Striga asiatica scaffold23 5 CH_sas_225 2 5 0.000625313
Sequoiadendron giganteum chr9 5 CH_sgi_426 4 4 0.000000000000346852
Trochodendron aralioides group0 5 CH_tar_501 2 2 0.0000600366
Utricularia gibba unitig_27 5 CH_ugi_129 2 2 0.0000820479
Vitis vinifera chr1 5 CH_vvi_601 2 2 0.000228189
Arabidopsis lyrata scaffold_1 6 CH_aly_676 2 2 0.000660044
Ceratophyllum demersum 4 6 CH_cde_402 2 2 0.000473878
Ceratophyllum demersum 5 6 CH_cde_403 2 2 0.000473878
Erigeron canadensis Conyza_canadensis_scaffold:7 6 CH_eca_627 2 2 0.000134617
Malus domestica Chr16 6 CH_mdo_410 3 4 0.0000000345119
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1111 2 2 0.000119596
Striga asiatica scaffold23 6 CH_sas_225 2 5 0.000625313
Sequoiadendron giganteum chr9 6 CH_sgi_426 4 4 0.000000000000346852
Trochodendron aralioides group0 6 CH_tar_501 2 2 0.0000600366
Utricularia gibba unitig_27 6 CH_ugi_129 2 2 0.0000820479
Vitis vinifera chr1 6 CH_vvi_601 2 2 0.000228189

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001