Functional clusters
Information
- Type InterPro
- Description Transcription factor IIA, alpha/beta subunit
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-1 | 5 | CH_aar_206 | 3 | 7 | 0.00000436798 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 5 | CH_arhy_1153 | 2 | 2 | 0.000449075 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.08 | 5 | CH_arhy_1154 | 2 | 2 | 0.000449075 |
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 5 | CH_atr_571 | 2 | 2 | 0.000476644 |
| Amborella trichopoda | AmTr_v1.0_scaffold00009 | 5 | CH_atr_572 | 2 | 2 | 0.000476644 |
| Camellia sinensis var. sinensis | Chr11 | 5 | CH_camsi_1275 | 2 | 3 | 0.000412677 |
| Eutrema salsugineum | scaffold_5 | 5 | CH_esa_486 | 2 | 3 | 0.000685305 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 5 | CH_lsa_764 | 2 | 2 | 0.000308404 |
| Petunia axillaris | Peaxi162Scf00481 | 5 | CH_pax_519 | 2 | 3 | 0.00021106 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 5 | CH_rch_689 | 3 | 9 | 0.000000800825 |
| Trochodendron aralioides | group16 | 5 | CH_tar_770 | 2 | 2 | 0.00036022 |
| Aethionema arabicum | LG-1 | 6 | CH_aar_206 | 3 | 7 | 0.00000436798 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 6 | CH_arhy_1153 | 2 | 2 | 0.000449075 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.08 | 6 | CH_arhy_1154 | 2 | 2 | 0.000449075 |
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 6 | CH_atr_571 | 2 | 2 | 0.000476644 |
| Amborella trichopoda | AmTr_v1.0_scaffold00009 | 6 | CH_atr_572 | 2 | 2 | 0.000476644 |
| Camellia sinensis var. sinensis | Chr11 | 6 | CH_camsi_1275 | 2 | 3 | 0.000412677 |
| Eutrema salsugineum | scaffold_5 | 6 | CH_esa_486 | 2 | 3 | 0.000685305 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 6 | CH_lsa_764 | 2 | 2 | 0.000308404 |
| Petunia axillaris | Peaxi162Scf00481 | 6 | CH_pax_519 | 2 | 3 | 0.00021106 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 6 | CH_rch_689 | 3 | 9 | 0.000000800825 |
| Trochodendron aralioides | group16 | 6 | CH_tar_770 | 2 | 2 | 0.00036022 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |