Functional clusters
Information
- Type InterPro
- Description AP endonuclease 1
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Chenopodium quinoa | C_Quinoa_Scaffold_3792 | 5 | CH_cqu_1062 | 2 | 2 | 0.000995025 |
Eucalyptus grandis | Chr09 | 5 | CH_egr_1405 | 2 | 2 | 0.000877912 |
Lupinus albus | Lalb_Chr05 | 5 | CH_lal_683 | 2 | 2 | 0.000524824 |
Oryza sativa ssp. japonica | chr01 | 5 | CH_osa_641 | 2 | 3 | 0.000316874 |
Sequoiadendron giganteum | chr3 | 5 | CH_sgi_1565 | 3 | 3 | 0.0000439319 |
Vanilla planifolia | CM028160.1 | 5 | CH_vpl_152 | 4 | 20 | 0.000000204823 |
Vitis vinifera | chr4 | 5 | CH_vvi_681 | 2 | 2 | 0.000456378 |
Chenopodium quinoa | C_Quinoa_Scaffold_3792 | 6 | CH_cqu_1062 | 2 | 2 | 0.000995025 |
Eucalyptus grandis | Chr09 | 6 | CH_egr_1405 | 2 | 2 | 0.000877912 |
Lupinus albus | Lalb_Chr05 | 6 | CH_lal_683 | 2 | 2 | 0.000524824 |
Oryza sativa ssp. japonica | chr01 | 6 | CH_osa_641 | 2 | 3 | 0.000316874 |
Sequoiadendron giganteum | chr3 | 6 | CH_sgi_1565 | 3 | 3 | 0.0000439319 |
Vanilla planifolia | CM028160.1 | 6 | CH_vpl_152 | 4 | 20 | 0.000000204823 |
Vitis vinifera | chr4 | 6 | CH_vvi_681 | 2 | 2 | 0.000456378 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |