Functional clusters

Information

  • Type InterPro
  • Description tRNA pseudouridine synthase B family

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C2 5 CH_bol_270 3 7 0.000000224339
Camellia sinensis var. sinensis Chr4 5 CH_camsi_146 5 13 0.0000000000000426733
Eutrema salsugineum scaffold_3 5 CH_esa_496 2 5 0.000761412
Magnolia biondii Chr11 5 CH_mbi_216 4 12 0.000000000170088
Physcomitrium patens Chr22 5 CH_ppa_206 2 3 0.000183812
Sequoiadendron giganteum chr6 5 CH_sgi_2048 2 2 0.000146145
Utricularia gibba unitig_8 5 CH_ugi_248 2 2 0.000246144
Brassica oleracea C2 6 CH_bol_270 3 7 0.000000224339
Camellia sinensis var. sinensis Chr4 6 CH_camsi_146 5 13 0.0000000000000426733
Eutrema salsugineum scaffold_3 6 CH_esa_496 2 5 0.000761412
Magnolia biondii Chr11 6 CH_mbi_216 4 12 0.000000000170088
Physcomitrium patens Chr22 6 CH_ppa_206 2 3 0.000183812
Sequoiadendron giganteum chr6 6 CH_sgi_2048 2 2 0.000146145
Utricularia gibba unitig_8 6 CH_ugi_248 2 2 0.000246144

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001