Functional clusters

Information

  • Type InterPro
  • Description Bile acid:sodium symporter

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica rapa A03 5 CH_bra_91 4 6 0.00000000117478
Camellia sinensis var. sinensis Chr6 5 CH_camsi_503 3 3 0.000000110392
Corylus avellana 4 5 CH_cav_457 3 11 0.0000508595
Chara braunii BFEA01000516 5 CH_cbr_259 2 2 0.000215781
Chlamydomonas reinhardtii chromosome_10 5 CH_cre_181 2 2 0.0006824
Eucalyptus grandis Chr05 5 CH_egr_772 3 4 0.000000411028
Lotus japonicus chr2 5 CH_lja_586 2 2 0.000715077
Lactuca sativa Lsat_1_v8_lg_6 5 CH_lsa_173 4 4 0.0000000000285206
Malus domestica Chr03 5 CH_mdo_250 4 4 0.000000000223318
Malus domestica Chr11 5 CH_mdo_816 3 7 0.0000343252
Medicago truncatula chr2 5 CH_mtr_962 3 12 0.0000467471
Pisum sativum chr1LG6 5 CH_psa_605 2 2 0.000312981
Pisum sativum chr2LG1 5 CH_psa_606 2 2 0.000312981
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_1376 2 2 0.000597979
Sequoiadendron giganteum chr11 5 CH_sgi_2399 2 2 0.000487151
Solanum pennellii Spenn-ch01 5 CH_spe_332 3 5 0.000000593443
Vigna mungo CM024079.1 5 CH_vmu_623 2 2 0.000969211
Vitis vinifera chr19 5 CH_vvi_757 2 2 0.00076063
Brassica rapa A03 6 CH_bra_91 4 6 0.00000000117478
Camellia sinensis var. sinensis Chr6 6 CH_camsi_503 3 3 0.000000110392
Corylus avellana 4 6 CH_cav_457 3 11 0.0000508595
Chara braunii BFEA01000516 6 CH_cbr_259 2 2 0.000215781
Chlamydomonas reinhardtii chromosome_10 6 CH_cre_181 2 2 0.0006824
Eucalyptus grandis Chr05 6 CH_egr_772 3 4 0.000000411028
Lotus japonicus chr2 6 CH_lja_586 2 2 0.000715077
Lactuca sativa Lsat_1_v8_lg_6 6 CH_lsa_173 4 4 0.0000000000285206
Malus domestica Chr03 6 CH_mdo_250 4 4 0.000000000223318
Malus domestica Chr11 6 CH_mdo_816 3 7 0.0000343252
Medicago truncatula chr2 6 CH_mtr_962 3 12 0.0000467471
Pisum sativum chr1LG6 6 CH_psa_605 2 2 0.000312981
Pisum sativum chr2LG1 6 CH_psa_606 2 2 0.000312981
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_1376 2 2 0.000597979
Sequoiadendron giganteum chr11 6 CH_sgi_2399 2 2 0.000487151
Solanum pennellii Spenn-ch01 6 CH_spe_332 3 5 0.000000593443
Vigna mungo CM024079.1 6 CH_vmu_623 2 2 0.000969211
Vitis vinifera chr19 6 CH_vvi_757 2 2 0.00076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001