Functional clusters

Information

  • Type InterPro
  • Description Proline-tRNA ligase, class IIa, archaeal-type

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB06 5 CH_bca_723 4 23 0.00000079209
Brassica oleracea C4 5 CH_bol_333 3 4 0.0000010576
Camellia sinensis var. sinensis Chr11 5 CH_camsi_204 4 4 0.00000000000433905
Capsicum annuum PGAv.1.6.scaffold407 5 CH_can_668 2 2 0.000247831
Carica papaya supercontig_107 5 CH_cpa_634 2 5 0.000950525
Chenopodium quinoa C_Quinoa_Scaffold_2314 5 CH_cqu_481 3 5 0.00000282811
Fragaria vesca Fvb2 5 CH_fve_822 2 2 0.000883652
Malus domestica Chr07 5 CH_mdo_1212 2 2 0.000379212
Medicago truncatula chr3 5 CH_mtr_1271 2 2 0.000410863
Populus trichocarpa Chr04 5 CH_ptr_737 2 2 0.000578001
Vigna mungo CM024077.1 5 CH_vmu_503 2 2 0.000387685
Brassica carinata ChrB06 6 CH_bca_723 4 23 0.00000079209
Brassica oleracea C4 6 CH_bol_333 3 4 0.0000010576
Camellia sinensis var. sinensis Chr11 6 CH_camsi_204 4 4 0.00000000000433905
Capsicum annuum PGAv.1.6.scaffold407 6 CH_can_668 2 2 0.000247831
Carica papaya supercontig_107 6 CH_cpa_634 2 5 0.000950525
Chenopodium quinoa C_Quinoa_Scaffold_2314 6 CH_cqu_481 3 5 0.00000282811
Fragaria vesca Fvb2 6 CH_fve_822 2 2 0.000883652
Malus domestica Chr07 6 CH_mdo_1212 2 2 0.000379212
Medicago truncatula chr3 6 CH_mtr_1271 2 2 0.000410863
Populus trichocarpa Chr04 6 CH_ptr_737 2 2 0.000578001
Vigna mungo CM024077.1 6 CH_vmu_503 2 2 0.000387685

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001