Functional clusters

Information

  • Type InterPro
  • Description Isopropylmalate dehydrogenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-4 5 CH_aar_335 2 2 0.000273698
Actinidia chinensis Lachesis_group1 5 CH_ach_337 2 2 0.000162964
Arabidopsis lyrata scaffold_2 5 CH_aly_599 2 2 0.000396027
Arabidopsis thaliana Chr1 5 CH_ath_466 2 2 0.000171895
Brassica carinata ChrB05 5 CH_bca_1785 2 2 0.000448905
Brassica carinata ChrC03 5 CH_bca_606 3 5 0.000000239882
Brassica napus A02 5 CH_bna_493 3 4 0.000000248053
Brassica napus C02 5 CH_bna_494 3 4 0.000000248053
Brassica oleracea C2 5 CH_bol_215 3 3 0.0000000320521
Brassica rapa A02 5 CH_bra_156 3 4 0.000000110583
Cicer arietinum L. Ca_LG1_v3 5 CH_car_55 3 4 0.0000000363451
Capsella rubella scaffold_2 5 CH_cru_531 2 2 0.000219346
Erythranthe guttata scaffold_9 5 CH_egut_493 2 2 0.0000728147
Fragaria vesca Fvb1 5 CH_fve_757 2 3 0.000530165
Lupinus albus Lalb_Chr22 5 CH_lal_601 2 2 0.000314895
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1303 2 5 0.000398629
Sequoiadendron giganteum chr1 5 CH_sgi_778 3 3 0.00000000355983
Schrenkiella parvula ch5-7 5 CH_spa_326 2 2 0.000472404
Trochodendron aralioides group1 5 CH_tar_843 2 3 0.000540303
Tarenaya hassleriana NW_010965372.1 5 CH_tha_242 2 2 0.000209541
Aethionema arabicum LG-4 6 CH_aar_335 2 2 0.000273698
Actinidia chinensis Lachesis_group1 6 CH_ach_337 2 2 0.000162964
Arabidopsis lyrata scaffold_2 6 CH_aly_599 2 2 0.000396027
Arabidopsis thaliana Chr1 6 CH_ath_466 2 2 0.000171895
Brassica carinata ChrB05 6 CH_bca_1785 2 2 0.000448905
Brassica carinata ChrC03 6 CH_bca_606 3 5 0.000000239882
Brassica napus A02 6 CH_bna_493 3 4 0.000000248053
Brassica napus C02 6 CH_bna_494 3 4 0.000000248053
Brassica oleracea C2 6 CH_bol_215 3 3 0.0000000320521
Brassica rapa A02 6 CH_bra_156 3 4 0.000000110583
Cicer arietinum L. Ca_LG1_v3 6 CH_car_55 3 4 0.0000000363451
Capsella rubella scaffold_2 6 CH_cru_531 2 2 0.000219346
Erythranthe guttata scaffold_9 6 CH_egut_493 2 2 0.0000728147
Fragaria vesca Fvb1 6 CH_fve_757 2 3 0.000530165
Lupinus albus Lalb_Chr22 6 CH_lal_601 2 2 0.000314895
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1303 2 5 0.000398629
Sequoiadendron giganteum chr1 6 CH_sgi_778 3 3 0.00000000355983
Schrenkiella parvula ch5-7 6 CH_spa_326 2 2 0.000472404
Trochodendron aralioides group1 6 CH_tar_843 2 3 0.000540303
Tarenaya hassleriana NW_010965372.1 6 CH_tha_242 2 2 0.000209541

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001