Functional clusters

Information

  • Type InterPro
  • Description Peptide chain release factor eRF1/aRF1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 5 CH_acertr_879 2 2 0.000422982
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 5 CH_amhyb_312 2 2 0.000252525
Brassica carinata ChrB03 5 CH_bca_2134 2 2 0.000961939
Cannabis sativa NC_044379.1 5 CH_cansat_186 3 5 0.0000000646747
Capsicum annuum PGAv.1.6.scaffold1190 5 CH_can_840 2 2 0.000826105
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_754 2 2 0.000448722
Fragaria vesca Fvb2 5 CH_fve_710 2 2 0.000353461
Helianthus annuus HanXRQChr03 5 CH_han_1179 2 2 0.0008115
Helianthus annuus HanXRQChr13 5 CH_han_1180 2 2 0.0008115
Lactuca sativa Lsat_1_v8_lg_2 5 CH_lsa_385 3 4 0.000000317025
Manihot esculenta Chromosome11 5 CH_mes_626 2 2 0.000366379
Medicago truncatula chr6 5 CH_mtr_714 3 6 0.00000177209
Punica granatum NC_045132.1 5 CH_pgr_176 4 15 0.00000000864476
Quercus lobata 9 5 CH_qlo_903 3 4 0.000000559721
Rhododendron simsii chr07 5 CH_rsi_928 2 3 0.000580745
Salvia bowleyana GWHASIU00000002 5 CH_sbo_651 2 2 0.000272988
Simmondsia chinensis GWHAASQ00000015 5 CH_sci_386 2 2 0.000255428
Sequoiadendron giganteum chr5 5 CH_sgi_2046 2 2 0.000146145
Solanum tuberosum ST4.03ch07 5 CH_stu_859 2 2 0.000512453
Vanilla planifolia CM028155.1 5 CH_vpl_39 5 10 0.000000000000337954
Acer truncatum chr6 6 CH_acertr_879 2 2 0.000422982
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 6 CH_amhyb_312 2 2 0.000252525
Brassica carinata ChrB03 6 CH_bca_2134 2 2 0.000961939
Cannabis sativa NC_044379.1 6 CH_cansat_186 3 5 0.0000000646747
Capsicum annuum PGAv.1.6.scaffold1190 6 CH_can_840 2 2 0.000826105
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_754 2 2 0.000448722
Fragaria vesca Fvb2 6 CH_fve_710 2 2 0.000353461
Helianthus annuus HanXRQChr03 6 CH_han_1179 2 2 0.0008115
Helianthus annuus HanXRQChr13 6 CH_han_1180 2 2 0.0008115
Lactuca sativa Lsat_1_v8_lg_2 6 CH_lsa_385 3 4 0.000000317025
Manihot esculenta Chromosome11 6 CH_mes_626 2 2 0.000366379
Medicago truncatula chr6 6 CH_mtr_714 3 6 0.00000177209
Punica granatum NC_045132.1 6 CH_pgr_176 4 15 0.00000000864476
Quercus lobata 9 6 CH_qlo_903 3 4 0.000000559721
Rhododendron simsii chr07 6 CH_rsi_928 2 3 0.000580745
Salvia bowleyana GWHASIU00000002 6 CH_sbo_651 2 2 0.000272988
Simmondsia chinensis GWHAASQ00000015 6 CH_sci_386 2 2 0.000255428
Sequoiadendron giganteum chr5 6 CH_sgi_2046 2 2 0.000146145
Solanum tuberosum ST4.03ch07 6 CH_stu_859 2 2 0.000512453
Vanilla planifolia CM028155.1 6 CH_vpl_39 5 10 0.000000000000337954

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001