Functional clusters
Information
- Type InterPro
- Description EXS, C-terminal
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrB08 | 5 | CH_bca_1388 | 3 | 5 | 0.0000971956 |
| Brassica carinata | ChrC05 | 5 | CH_bca_1529 | 3 | 6 | 0.000194324 |
| Brassica napus | C05 | 5 | CH_bna_447 | 4 | 6 | 0.0000000909444 |
| Brassica napus | A06 | 5 | CH_bna_823 | 3 | 3 | 0.0000128189 |
| Brassica oleracea | C5 | 5 | CH_bol_299 | 4 | 9 | 0.000000473798 |
| Brassica rapa | A06 | 5 | CH_bra_314 | 3 | 4 | 0.0000254258 |
| Camellia sinensis var. sinensis | Chr6 | 5 | CH_camsi_124 | 6 | 10 | 0.00000000000000766593 |
| Camellia sinensis var. sinensis | Chr4 | 5 | CH_camsi_845 | 3 | 5 | 0.000017654 |
| Citrus clementina | scaffold_6 | 5 | CH_ccl_371 | 3 | 3 | 0.00000121129 |
| Carya illinoinensis | Chr07 | 5 | CH_cil_172 | 5 | 6 | 0.00000000000772171 |
| Corchorus olitorius | AWUE01019720.1 | 5 | CH_col_50 | 4 | 5 | 0.00000000560786 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 5 | CH_eca_222 | 4 | 10 | 0.0000000187685 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_831 | 3 | 3 | 0.00000113044 |
| Helianthus annuus | HanXRQChr14 | 5 | CH_han_257 | 6 | 36 | 0.000000000203315 |
| Helianthus annuus | HanXRQChr09 | 5 | CH_han_395 | 6 | 79 | 0.0000000286825 |
| Hydrangea macrophylla | Hma1.2p1_0409F.1 | 5 | CH_hma_124 | 3 | 3 | 0.0000000740453 |
| Malus domestica | Chr00 | 5 | CH_mdo_122 | 5 | 5 | 0.0000000000000677516 |
| Salix brachista | GWHAAZH00000010 | 5 | CH_sbr_375 | 3 | 4 | 0.00000866988 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_610 | 5 | 14 | 0.0000000000390225 |
| Theobroma cacao | Chromosome_2 | 5 | CH_tca_419 | 3 | 4 | 0.00000530909 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 5 | CH_tpr_441 | 3 | 8 | 0.000040391 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_272 | 3 | 3 | 0.00000108804 |
| Brassica carinata | ChrB08 | 6 | CH_bca_1388 | 3 | 5 | 0.0000971956 |
| Brassica carinata | ChrC05 | 6 | CH_bca_1529 | 3 | 6 | 0.000194324 |
| Brassica napus | C05 | 6 | CH_bna_447 | 4 | 6 | 0.0000000909444 |
| Brassica napus | A06 | 6 | CH_bna_823 | 3 | 3 | 0.0000128189 |
| Brassica oleracea | C5 | 6 | CH_bol_299 | 4 | 9 | 0.000000473798 |
| Brassica rapa | A06 | 6 | CH_bra_314 | 3 | 4 | 0.0000254258 |
| Camellia sinensis var. sinensis | Chr6 | 6 | CH_camsi_124 | 6 | 10 | 0.00000000000000766593 |
| Camellia sinensis var. sinensis | Chr4 | 6 | CH_camsi_845 | 3 | 5 | 0.000017654 |
| Citrus clementina | scaffold_6 | 6 | CH_ccl_371 | 3 | 3 | 0.00000121129 |
| Carya illinoinensis | Chr07 | 6 | CH_cil_172 | 5 | 6 | 0.00000000000772171 |
| Corchorus olitorius | AWUE01019720.1 | 6 | CH_col_50 | 4 | 5 | 0.00000000560786 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 6 | CH_eca_222 | 4 | 10 | 0.0000000187685 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_831 | 3 | 3 | 0.00000113044 |
| Helianthus annuus | HanXRQChr14 | 6 | CH_han_257 | 6 | 36 | 0.000000000203315 |
| Helianthus annuus | HanXRQChr09 | 6 | CH_han_395 | 6 | 79 | 0.0000000286825 |
| Hydrangea macrophylla | Hma1.2p1_0409F.1 | 6 | CH_hma_124 | 3 | 3 | 0.0000000740453 |
| Malus domestica | Chr00 | 6 | CH_mdo_122 | 5 | 5 | 0.0000000000000677516 |
| Salix brachista | GWHAAZH00000010 | 6 | CH_sbr_375 | 3 | 4 | 0.00000866988 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_610 | 5 | 14 | 0.0000000000390225 |
| Theobroma cacao | Chromosome_2 | 6 | CH_tca_419 | 3 | 4 | 0.00000530909 |
| Trifolium pratense | Tp57577_TGAC_v2_LG3 | 6 | CH_tpr_441 | 3 | 8 | 0.000040391 |
| Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_272 | 3 | 3 | 0.00000108804 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |