Functional clusters

Information

  • Type InterPro
  • Description EXS, C-terminal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB08 5 CH_bca_1388 3 5 0.0000971956
Brassica carinata ChrC05 5 CH_bca_1529 3 6 0.000194324
Brassica napus C05 5 CH_bna_447 4 6 0.0000000909444
Brassica napus A06 5 CH_bna_823 3 3 0.0000128189
Brassica oleracea C5 5 CH_bol_299 4 9 0.000000473798
Brassica rapa A06 5 CH_bra_314 3 4 0.0000254258
Camellia sinensis var. sinensis Chr6 5 CH_camsi_124 6 10 0.00000000000000766593
Camellia sinensis var. sinensis Chr4 5 CH_camsi_845 3 5 0.000017654
Citrus clementina scaffold_6 5 CH_ccl_371 3 3 0.00000121129
Carya illinoinensis Chr07 5 CH_cil_172 5 6 0.00000000000772171
Corchorus olitorius AWUE01019720.1 5 CH_col_50 4 5 0.00000000560786
Erigeron canadensis Conyza_canadensis_scaffold:2 5 CH_eca_222 4 10 0.0000000187685
Eucalyptus grandis Chr08 5 CH_egr_831 3 3 0.00000113044
Helianthus annuus HanXRQChr14 5 CH_han_257 6 36 0.000000000203315
Helianthus annuus HanXRQChr09 5 CH_han_395 6 79 0.0000000286825
Hydrangea macrophylla Hma1.2p1_0409F.1 5 CH_hma_124 3 3 0.0000000740453
Malus domestica Chr00 5 CH_mdo_122 5 5 0.0000000000000677516
Salix brachista GWHAAZH00000010 5 CH_sbr_375 3 4 0.00000866988
Sequoiadendron giganteum chr2 5 CH_sgi_610 5 14 0.0000000000390225
Theobroma cacao Chromosome_2 5 CH_tca_419 3 4 0.00000530909
Trifolium pratense Tp57577_TGAC_v2_LG3 5 CH_tpr_441 3 8 0.000040391
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_272 3 3 0.00000108804
Brassica carinata ChrB08 6 CH_bca_1388 3 5 0.0000971956
Brassica carinata ChrC05 6 CH_bca_1529 3 6 0.000194324
Brassica napus C05 6 CH_bna_447 4 6 0.0000000909444
Brassica napus A06 6 CH_bna_823 3 3 0.0000128189
Brassica oleracea C5 6 CH_bol_299 4 9 0.000000473798
Brassica rapa A06 6 CH_bra_314 3 4 0.0000254258
Camellia sinensis var. sinensis Chr6 6 CH_camsi_124 6 10 0.00000000000000766593
Camellia sinensis var. sinensis Chr4 6 CH_camsi_845 3 5 0.000017654
Citrus clementina scaffold_6 6 CH_ccl_371 3 3 0.00000121129
Carya illinoinensis Chr07 6 CH_cil_172 5 6 0.00000000000772171
Corchorus olitorius AWUE01019720.1 6 CH_col_50 4 5 0.00000000560786
Erigeron canadensis Conyza_canadensis_scaffold:2 6 CH_eca_222 4 10 0.0000000187685
Eucalyptus grandis Chr08 6 CH_egr_831 3 3 0.00000113044
Helianthus annuus HanXRQChr14 6 CH_han_257 6 36 0.000000000203315
Helianthus annuus HanXRQChr09 6 CH_han_395 6 79 0.0000000286825
Hydrangea macrophylla Hma1.2p1_0409F.1 6 CH_hma_124 3 3 0.0000000740453
Malus domestica Chr00 6 CH_mdo_122 5 5 0.0000000000000677516
Salix brachista GWHAAZH00000010 6 CH_sbr_375 3 4 0.00000866988
Sequoiadendron giganteum chr2 6 CH_sgi_610 5 14 0.0000000000390225
Theobroma cacao Chromosome_2 6 CH_tca_419 3 4 0.00000530909
Trifolium pratense Tp57577_TGAC_v2_LG3 6 CH_tpr_441 3 8 0.000040391
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_272 3 3 0.00000108804

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001