Functional clusters
Information
- Type InterPro
- Description SBP domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_344 | 5 | CH_aag_328 | 2 | 2 | 0.000481541 |
| Daucus carota | DCARv2_Chr4 | 5 | CH_dca_330 | 3 | 3 | 0.00000811507 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 5 | CH_lsa_530 | 3 | 3 | 0.0000115922 |
| Malus domestica | Chr06 | 5 | CH_mdo_1371 | 3 | 8 | 0.00072118 |
| Manihot esculenta | Chromosome13 | 5 | CH_mes_381 | 5 | 36 | 0.0000025414 |
| Marchantia polymorpha | scaffold_14 | 5 | CH_mpo_212 | 2 | 2 | 0.000662654 |
| Medicago truncatula | chr8 | 5 | CH_mtr_788 | 3 | 3 | 0.00000512513 |
| Physcomitrium patens | Chr16 | 5 | CH_ppa_113 | 3 | 5 | 0.0000160982 |
| Trochodendron aralioides | group0 | 5 | CH_tar_451 | 3 | 3 | 0.0000268175 |
| Tarenaya hassleriana | NW_010967884.1 | 5 | CH_tha_179 | 3 | 4 | 0.0000389129 |
| Anthoceros agrestis | Sc2ySwM_344 | 6 | CH_aag_328 | 2 | 2 | 0.000481541 |
| Daucus carota | DCARv2_Chr4 | 6 | CH_dca_330 | 3 | 3 | 0.00000811507 |
| Lactuca sativa | Lsat_1_v8_lg_1 | 6 | CH_lsa_530 | 3 | 3 | 0.0000115922 |
| Malus domestica | Chr06 | 6 | CH_mdo_1371 | 3 | 8 | 0.00072118 |
| Manihot esculenta | Chromosome13 | 6 | CH_mes_381 | 5 | 36 | 0.0000025414 |
| Marchantia polymorpha | scaffold_14 | 6 | CH_mpo_212 | 2 | 2 | 0.000662654 |
| Medicago truncatula | chr8 | 6 | CH_mtr_788 | 3 | 3 | 0.00000512513 |
| Physcomitrium patens | Chr16 | 6 | CH_ppa_113 | 3 | 5 | 0.0000160982 |
| Trochodendron aralioides | group0 | 6 | CH_tar_451 | 3 | 3 | 0.0000268175 |
| Tarenaya hassleriana | NW_010967884.1 | 6 | CH_tha_179 | 3 | 4 | 0.0000389129 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |