Functional clusters
Information
- Type InterPro
- Description Exostosin-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_9 | 5 | CH_amhyb_264 | 3 | 3 | 0.0000971349 |
| Brassica carinata | ChrC06 | 5 | CH_bca_1545 | 3 | 3 | 0.00021257 |
| Brassica carinata | ChrB01 | 5 | CH_bca_1546 | 3 | 3 | 0.00021257 |
| Brassica napus | C04 | 5 | CH_bna_1127 | 3 | 3 | 0.000168221 |
| Camellia sinensis var. sinensis | Chr7 | 5 | CH_camsi_93 | 8 | 11 | 2.08451e-16 |
| Coffea canephora | chr8 | 5 | CH_ccan_183 | 4 | 18 | 0.000000150087 |
| Ceratophyllum demersum | 6 | 5 | CH_cde_271 | 4 | 13 | 0.000155587 |
| Davidia involucrata | GWHABJS00000021 | 5 | CH_din_496 | 3 | 3 | 0.0000930639 |
| Lupinus albus | Lalb_Chr13 | 5 | CH_lal_42 | 7 | 7 | 0.00000000000000143169 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_851 | 3 | 3 | 0.000141142 |
| Magnolia biondii | Chr12 | 5 | CH_mbi_717 | 3 | 3 | 0.0000468584 |
| Populus trichocarpa | Chr07 | 5 | CH_ptr_588 | 4 | 11 | 0.000154063 |
| Quercus lobata | 3 | 5 | CH_qlo_1378 | 3 | 3 | 0.000143903 |
| Quercus lobata | 5 | 5 | CH_qlo_1379 | 3 | 3 | 0.000143903 |
| Rhododendron simsii | chr06 | 5 | CH_rsi_288 | 6 | 11 | 0.0000000010483 |
| Rhododendron simsii | chr02 | 5 | CH_rsi_467 | 4 | 4 | 0.000000581071 |
| Sapria himalayana | scaffold56_3489501 | 5 | CH_shi_190 | 4 | 10 | 0.000000859383 |
| Theobroma cacao | Chromosome_9 | 5 | CH_tca_576 | 3 | 3 | 0.000188489 |
| Tripterygium wilfordii | NC_052248.1 | 5 | CH_twi_443 | 3 | 3 | 0.000314824 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_9 | 6 | CH_amhyb_264 | 3 | 3 | 0.0000971349 |
| Brassica carinata | ChrC06 | 6 | CH_bca_1545 | 3 | 3 | 0.00021257 |
| Brassica carinata | ChrB01 | 6 | CH_bca_1546 | 3 | 3 | 0.00021257 |
| Brassica napus | C04 | 6 | CH_bna_1127 | 3 | 3 | 0.000168221 |
| Camellia sinensis var. sinensis | Chr7 | 6 | CH_camsi_93 | 8 | 11 | 2.08451e-16 |
| Coffea canephora | chr8 | 6 | CH_ccan_183 | 4 | 18 | 0.000000150087 |
| Ceratophyllum demersum | 6 | 6 | CH_cde_271 | 4 | 13 | 0.000155587 |
| Davidia involucrata | GWHABJS00000021 | 6 | CH_din_496 | 3 | 3 | 0.0000930639 |
| Fragaria x ananassa | Fvb4-2 | 6 | CH_fan_492 | 4 | 5 | 0.00000213899 |
| Lupinus albus | Lalb_Chr13 | 6 | CH_lal_42 | 7 | 7 | 0.00000000000000143169 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_851 | 3 | 3 | 0.000141142 |
| Magnolia biondii | Chr12 | 6 | CH_mbi_717 | 3 | 3 | 0.0000468584 |
| Populus trichocarpa | Chr07 | 6 | CH_ptr_588 | 4 | 11 | 0.000154063 |
| Quercus lobata | 3 | 6 | CH_qlo_1378 | 3 | 3 | 0.000143903 |
| Quercus lobata | 5 | 6 | CH_qlo_1379 | 3 | 3 | 0.000143903 |
| Rhododendron simsii | chr06 | 6 | CH_rsi_288 | 6 | 11 | 0.0000000010483 |
| Rhododendron simsii | chr02 | 6 | CH_rsi_467 | 4 | 4 | 0.000000581071 |
| Sapria himalayana | scaffold56_3489501 | 6 | CH_shi_190 | 4 | 10 | 0.000000859383 |
| Theobroma cacao | Chromosome_9 | 6 | CH_tca_576 | 3 | 3 | 0.000188489 |
| Tripterygium wilfordii | NC_052248.1 | 6 | CH_twi_443 | 3 | 3 | 0.000314824 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |