Functional clusters
Information
- Type InterPro
- Description O-acyltransferase, WSD1, N-terminal
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-3 | 5 | CH_aar_238 | 3 | 4 | 0.0000181714 |
| Arabidopsis lyrata | scaffold_5 | 5 | CH_aly_301 | 3 | 3 | 0.00000143772 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.20 | 5 | CH_arhy_770 | 3 | 4 | 0.0000108821 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.10 | 5 | CH_arhy_771 | 3 | 4 | 0.0000108821 |
| Arabidopsis thaliana | Chr3 | 5 | CH_ath_228 | 3 | 3 | 0.000000203145 |
| Brassica carinata | ChrB03 | 5 | CH_bca_373 | 5 | 17 | 0.00000000635229 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 5 | CH_bvu_253 | 3 | 3 | 0.00000294069 |
| Cannabis sativa | NC_044371.1 | 5 | CH_cansat_65 | 5 | 7 | 0.000000000000163972 |
| Cardamine hirsuta | Chr8 | 5 | CH_chi_315 | 3 | 3 | 0.000000602003 |
| Carya illinoinensis | Chr06 | 5 | CH_cil_107 | 5 | 5 | 0.00000000000000620034 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1810 | 5 | CH_cqu_250 | 4 | 4 | 0.00000000653461 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1611 | 5 | CH_cqu_549 | 3 | 3 | 0.0000110325 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1257 | 5 | CH_cqu_550 | 3 | 3 | 0.0000110325 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2646 | 5 | CH_cqu_703 | 3 | 5 | 0.000110222 |
| Durio zibethinus | NW_019167893.1 | 5 | CH_dzi_534 | 2 | 2 | 0.000463489 |
| Erythranthe guttata | scaffold_6 | 5 | CH_egut_338 | 3 | 3 | 0.00000095439 |
| Eutrema salsugineum | scaffold_2 | 5 | CH_esa_109 | 4 | 4 | 0.000000000437212 |
| Eutrema salsugineum | scaffold_9 | 5 | CH_esa_250 | 3 | 4 | 0.0000057395 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_488 | 3 | 5 | 0.00000475425 |
| Medicago truncatula | chr4 | 5 | CH_mtr_64 | 10 | 35 | 3.46735e-24 |
| Oryza sativa ssp. japonica | chr01 | 5 | CH_osa_639 | 2 | 2 | 0.000316874 |
| Punica granatum | NC_045128.1 | 5 | CH_pgr_558 | 2 | 2 | 0.000450214 |
| Prunus persica | Pp03 | 5 | CH_ppe_221 | 5 | 10 | 0.000000000255203 |
| Papaver somniferum | NW_020618825.1 | 5 | CH_pso_1162 | 3 | 9 | 0.00049604 |
| Populus trichocarpa | Chr17 | 5 | CH_ptr_401 | 3 | 4 | 0.00000168357 |
| Salix brachista | GWHAAZH00000017 | 5 | CH_sbr_190 | 4 | 5 | 0.00000000512202 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_946 | 4 | 5 | 0.0000000153508 |
| Schrenkiella parvula | ch5-1 | 5 | CH_spa_157 | 3 | 3 | 0.00000204576 |
| Schrenkiella parvula | ch5-6 | 5 | CH_spa_158 | 3 | 3 | 0.00000204576 |
| Aethionema arabicum | LG-3 | 6 | CH_aar_238 | 3 | 4 | 0.0000181714 |
| Arabidopsis lyrata | scaffold_5 | 6 | CH_aly_301 | 3 | 3 | 0.00000143772 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.20 | 6 | CH_arhy_770 | 3 | 4 | 0.0000108821 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.10 | 6 | CH_arhy_771 | 3 | 4 | 0.0000108821 |
| Arabidopsis thaliana | Chr3 | 6 | CH_ath_228 | 3 | 3 | 0.000000203145 |
| Brassica carinata | ChrB03 | 6 | CH_bca_373 | 5 | 17 | 0.00000000635229 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 6 | CH_bvu_253 | 3 | 3 | 0.00000294069 |
| Cannabis sativa | NC_044371.1 | 6 | CH_cansat_65 | 5 | 7 | 0.000000000000163972 |
| Cardamine hirsuta | Chr8 | 6 | CH_chi_315 | 3 | 3 | 0.000000602003 |
| Carya illinoinensis | Chr06 | 6 | CH_cil_107 | 5 | 5 | 0.00000000000000620034 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1810 | 6 | CH_cqu_250 | 4 | 4 | 0.00000000653461 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1611 | 6 | CH_cqu_549 | 3 | 3 | 0.0000110325 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1257 | 6 | CH_cqu_550 | 3 | 3 | 0.0000110325 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2646 | 6 | CH_cqu_703 | 3 | 5 | 0.000110222 |
| Durio zibethinus | NW_019167893.1 | 6 | CH_dzi_534 | 2 | 2 | 0.000463489 |
| Erythranthe guttata | scaffold_6 | 6 | CH_egut_338 | 3 | 3 | 0.00000095439 |
| Eutrema salsugineum | scaffold_2 | 6 | CH_esa_109 | 4 | 4 | 0.000000000437212 |
| Eutrema salsugineum | scaffold_9 | 6 | CH_esa_250 | 3 | 4 | 0.0000057395 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_488 | 3 | 5 | 0.00000475425 |
| Medicago truncatula | chr4 | 6 | CH_mtr_64 | 10 | 35 | 3.46735e-24 |
| Oryza sativa ssp. japonica | chr01 | 6 | CH_osa_639 | 2 | 2 | 0.000316874 |
| Punica granatum | NC_045128.1 | 6 | CH_pgr_558 | 2 | 2 | 0.000450214 |
| Prunus persica | Pp03 | 6 | CH_ppe_221 | 5 | 10 | 0.000000000255203 |
| Papaver somniferum | NW_020618825.1 | 6 | CH_pso_1162 | 3 | 9 | 0.00049604 |
| Populus trichocarpa | Chr17 | 6 | CH_ptr_401 | 3 | 4 | 0.00000168357 |
| Salix brachista | GWHAAZH00000017 | 6 | CH_sbr_190 | 4 | 5 | 0.00000000512202 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_946 | 4 | 5 | 0.0000000153508 |
| Schrenkiella parvula | ch5-1 | 6 | CH_spa_157 | 3 | 3 | 0.00000204576 |
| Schrenkiella parvula | ch5-6 | 6 | CH_spa_158 | 3 | 3 | 0.00000204576 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |