Functional clusters

Information

  • Type InterPro
  • Description Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group13 5 CH_ach_643 2 4 0.000977694
Aquilegia oxysepala CHR06 5 CH_aox_397 2 3 0.000240587
Brassica carinata ChrB02 5 CH_bca_608 3 3 0.000000249498
Brassica napus A05 5 CH_bna_1502 2 2 0.000835275
Brassica napus C06 5 CH_bna_1503 2 2 0.000835275
Brassica rapa A05 5 CH_bra_394 2 2 0.000128794
Camellia sinensis var. sinensis Chr11 5 CH_camsi_864 3 23 0.0000223254
Citrus clementina scaffold_7 5 CH_ccl_249 3 3 0.0000000100941
Citrullus lanatus CG_Chr04 5 CH_cla_376 2 5 0.000886997
Chenopodium quinoa C_Quinoa_Scaffold_1995 5 CH_cqu_607 3 5 0.0000274643
Chenopodium quinoa C_Quinoa_Scaffold_2088 5 CH_cqu_81 6 7 6.98252e-16
Chenopodium quinoa C_Quinoa_Scaffold_3429 5 CH_cqu_96 6 9 0.00000000000000837454
Gossypium hirsutum A05 5 CH_ghi_854 2 2 0.0000801047
Glycine max Gm16 5 CH_gma_801 2 2 0.000379557
Helianthus annuus HanXRQChr13 5 CH_han_675 4 55 0.00000740301
Lupinus albus Lalb_Chr03 5 CH_lal_135 3 3 0.00000000413171
Oryza sativa ssp. japonica chr01 5 CH_osa_477 2 2 0.0000528123
Papaver somniferum NC_039360.1 5 CH_pso_241 4 6 0.000000000036019
Salix brachista GWHAAZH00000019 5 CH_sbr_568 3 20 0.000237149
Selenicereus undatus Scaffold_33680 5 CH_sun_270 2 2 0.000217992
Trochodendron aralioides group1 5 CH_tar_645 2 2 0.00018011
Tripterygium wilfordii NC_052238.1 5 CH_twi_396 2 2 0.000167252
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_150 3 3 0.0000000129529
Vigna mungo CM024077.1 5 CH_vmu_497 2 4 0.00038766
Vanilla planifolia CM028158.1 5 CH_vpl_613 2 2 0.000443328
Vanilla planifolia JADCNL010000082.1 5 CH_vpl_614 2 2 0.000443328
Actinidia chinensis Lachesis_group13 6 CH_ach_643 2 4 0.000977694
Aquilegia oxysepala CHR06 6 CH_aox_397 2 3 0.000240587
Brassica carinata ChrB02 6 CH_bca_608 3 3 0.000000249498
Brassica napus A05 6 CH_bna_1502 2 2 0.000835275
Brassica napus C06 6 CH_bna_1503 2 2 0.000835275
Brassica rapa A05 6 CH_bra_394 2 2 0.000128794
Camellia sinensis var. sinensis Chr11 6 CH_camsi_864 3 23 0.0000223254
Citrus clementina scaffold_7 6 CH_ccl_249 3 3 0.0000000100941
Citrullus lanatus CG_Chr04 6 CH_cla_376 2 5 0.000886997
Chenopodium quinoa C_Quinoa_Scaffold_1995 6 CH_cqu_607 3 5 0.0000274643
Chenopodium quinoa C_Quinoa_Scaffold_2088 6 CH_cqu_81 6 7 6.98252e-16
Chenopodium quinoa C_Quinoa_Scaffold_3429 6 CH_cqu_96 6 9 0.00000000000000837454
Gossypium hirsutum A05 6 CH_ghi_854 2 2 0.0000801047
Glycine max Gm16 6 CH_gma_801 2 2 0.000379557
Helianthus annuus HanXRQChr13 6 CH_han_675 4 55 0.00000740301
Lupinus albus Lalb_Chr03 6 CH_lal_135 3 3 0.00000000413171
Oryza sativa ssp. japonica chr01 6 CH_osa_477 2 2 0.0000528123
Papaver somniferum NC_039360.1 6 CH_pso_241 4 6 0.000000000036019
Salix brachista GWHAAZH00000019 6 CH_sbr_568 3 20 0.000237149
Selenicereus undatus Scaffold_33680 6 CH_sun_270 2 2 0.000217992
Trochodendron aralioides group1 6 CH_tar_645 2 2 0.00018011
Tripterygium wilfordii NC_052238.1 6 CH_twi_396 2 2 0.000167252
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_150 3 3 0.0000000129529
Vigna mungo CM024077.1 6 CH_vmu_497 2 4 0.00038766
Vanilla planifolia CM028158.1 6 CH_vpl_613 2 2 0.000443328
Vanilla planifolia JADCNL010000082.1 6 CH_vpl_614 2 2 0.000443328

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001