Functional clusters
Information
- Type InterPro
- Description Zinc finger, MIZ-type
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cannabis sativa | NC_044374.1 | 5 | CH_cansat_520 | 2 | 2 | 0.000393985 |
| Carya illinoinensis | Chr13 | 5 | CH_cil_858 | 2 | 2 | 0.000929742 |
| Gossypium hirsutum | A13 | 5 | CH_ghi_1259 | 2 | 2 | 0.000747644 |
| Gossypium raimondii | Chr13 | 5 | CH_gra_566 | 2 | 2 | 0.000321664 |
| Lotus japonicus | Contig00312_ERROPOS870357 | 5 | CH_lja_599 | 2 | 2 | 0.000715077 |
| Vitis vinifera | chr15 | 5 | CH_vvi_770 | 2 | 2 | 0.00076063 |
| Cannabis sativa | NC_044374.1 | 6 | CH_cansat_520 | 2 | 2 | 0.000393985 |
| Carya illinoinensis | Chr13 | 6 | CH_cil_858 | 2 | 2 | 0.000929742 |
| Gossypium hirsutum | A13 | 6 | CH_ghi_1259 | 2 | 2 | 0.000747644 |
| Gossypium raimondii | Chr13 | 6 | CH_gra_566 | 2 | 2 | 0.000321664 |
| Lotus japonicus | Contig00312_ERROPOS870357 | 6 | CH_lja_599 | 2 | 2 | 0.000715077 |
| Vitis vinifera | chr15 | 6 | CH_vvi_770 | 2 | 2 | 0.00076063 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |