Functional clusters
Information
- Type InterPro
- Description Sec63 domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr1 | 5 | CH_acertr_264 | 4 | 12 | 0.00000006547 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_15 | 5 | CH_amhyb_110 | 3 | 3 | 0.000000212572 |
| Brassica napus | C07 | 5 | CH_bna_1058 | 3 | 9 | 0.0000997499 |
| Capsicum annuum | PGAv.1.6.scaffold993 | 5 | CH_can_342 | 3 | 3 | 0.000000573281 |
| Cicer arietinum L. | Ca_LG6_v3 | 5 | CH_car_89 | 3 | 3 | 0.000000318032 |
| Coffea canephora | chr5 | 5 | CH_ccan_462 | 2 | 2 | 0.0000894371 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_505 | 3 | 3 | 0.00000064559 |
| Nelumbo nucifera | chr4 | 5 | CH_nnu_595 | 2 | 2 | 0.000722526 |
| Nicotiana tabacum | Nitab4.5_0000110 | 5 | CH_nta_316 | 2 | 2 | 0.000658364 |
| Pisum sativum | chr7LG7 | 5 | CH_psa_727 | 2 | 2 | 0.000782452 |
| Solanum pennellii | Spenn-ch06 | 5 | CH_spe_842 | 2 | 2 | 0.000667186 |
| Solanum tuberosum | ST4.03ch06 | 5 | CH_stu_858 | 2 | 2 | 0.000512453 |
| Theobroma cacao | Chromosome_5 | 5 | CH_tca_402 | 3 | 5 | 0.00000281532 |
| Vanilla planifolia | CM028156.1 | 5 | CH_vpl_185 | 3 | 3 | 0.000000687914 |
| Acer truncatum | chr1 | 6 | CH_acertr_264 | 4 | 12 | 0.00000006547 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_15 | 6 | CH_amhyb_110 | 3 | 3 | 0.000000212572 |
| Brassica napus | C07 | 6 | CH_bna_1058 | 3 | 9 | 0.0000997499 |
| Capsicum annuum | PGAv.1.6.scaffold993 | 6 | CH_can_342 | 3 | 3 | 0.000000573281 |
| Cicer arietinum L. | Ca_LG6_v3 | 6 | CH_car_89 | 3 | 3 | 0.000000318032 |
| Coffea canephora | chr5 | 6 | CH_ccan_462 | 2 | 2 | 0.0000894371 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_505 | 3 | 3 | 0.00000064559 |
| Nelumbo nucifera | chr4 | 6 | CH_nnu_595 | 2 | 2 | 0.000722526 |
| Nicotiana tabacum | Nitab4.5_0000110 | 6 | CH_nta_316 | 2 | 2 | 0.000658364 |
| Pisum sativum | chr7LG7 | 6 | CH_psa_727 | 2 | 2 | 0.000782452 |
| Solanum pennellii | Spenn-ch06 | 6 | CH_spe_842 | 2 | 2 | 0.000667186 |
| Solanum tuberosum | ST4.03ch06 | 6 | CH_stu_858 | 2 | 2 | 0.000512453 |
| Theobroma cacao | Chromosome_5 | 6 | CH_tca_402 | 3 | 5 | 0.00000281532 |
| Vanilla planifolia | CM028156.1 | 6 | CH_vpl_185 | 3 | 3 | 0.000000687914 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |