Functional clusters
Information
- Type InterPro
- Description Translation elongation factor EFTu/EF1A, C-terminal
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC01 | 5 | CH_bca_1173 | 3 | 4 | 0.0000270801 |
| Chara braunii | BFEA01000221 | 5 | CH_cbr_22 | 5 | 8 | 0.00000000000141604 |
| Ceratophyllum demersum | 1 | 5 | CH_cde_270 | 3 | 7 | 0.000148775 |
| Ceratophyllum demersum | 7 | 5 | CH_cde_367 | 3 | 8 | 0.000237947 |
| Corchorus olitorius | AWUE01019427.1 | 5 | CH_col_191 | 2 | 3 | 0.000876168 |
| Capsella rubella | scaffold_1 | 5 | CH_cru_306 | 3 | 3 | 0.00000132315 |
| Cucumis sativus L. | chr5 | 5 | CH_csa_246 | 3 | 4 | 0.00000351133 |
| Erythranthe guttata | scaffold_4 | 5 | CH_egut_233 | 4 | 7 | 0.00000000850819 |
| Gossypium raimondii | Chr09 | 5 | CH_gra_344 | 3 | 3 | 0.00000491485 |
| Medicago truncatula | chr1 | 5 | CH_mtr_529 | 4 | 6 | 0.0000000638549 |
| Nicotiana tabacum | Nitab4.5_0000022 | 5 | CH_nta_62 | 4 | 9 | 0.0000000174651 |
| Physcomitrium patens | Chr02 | 5 | CH_ppa_277 | 4 | 38 | 0.000194807 |
| Papaver somniferum | NC_039366.1 | 5 | CH_pso_941 | 4 | 52 | 0.000116365 |
| Rhododendron simsii | chr02 | 5 | CH_rsi_543 | 3 | 4 | 0.00000549556 |
| Salvia bowleyana | GWHASIU00000006 | 5 | CH_sbo_255 | 4 | 8 | 0.0000000197835 |
| Selenicereus undatus | Scaffold_33680 | 5 | CH_sun_59 | 4 | 6 | 0.00000000854254 |
| Brassica carinata | ChrC01 | 6 | CH_bca_1173 | 3 | 4 | 0.0000270801 |
| Chara braunii | BFEA01000221 | 6 | CH_cbr_22 | 5 | 8 | 0.00000000000141604 |
| Ceratophyllum demersum | 1 | 6 | CH_cde_270 | 3 | 7 | 0.000148775 |
| Ceratophyllum demersum | 7 | 6 | CH_cde_367 | 3 | 8 | 0.000237947 |
| Corchorus olitorius | AWUE01019427.1 | 6 | CH_col_191 | 2 | 3 | 0.000876168 |
| Capsella rubella | scaffold_1 | 6 | CH_cru_306 | 3 | 3 | 0.00000132315 |
| Cucumis sativus L. | chr5 | 6 | CH_csa_246 | 3 | 4 | 0.00000351133 |
| Erythranthe guttata | scaffold_4 | 6 | CH_egut_233 | 4 | 7 | 0.00000000850819 |
| Gossypium raimondii | Chr09 | 6 | CH_gra_344 | 3 | 3 | 0.00000491485 |
| Medicago truncatula | chr1 | 6 | CH_mtr_529 | 4 | 6 | 0.0000000638549 |
| Nicotiana tabacum | Nitab4.5_0000022 | 6 | CH_nta_62 | 4 | 9 | 0.0000000174651 |
| Physcomitrium patens | Chr02 | 6 | CH_ppa_277 | 4 | 38 | 0.000194807 |
| Papaver somniferum | NC_039366.1 | 6 | CH_pso_941 | 4 | 52 | 0.000116365 |
| Rhododendron simsii | chr02 | 6 | CH_rsi_543 | 3 | 4 | 0.00000549556 |
| Salvia bowleyana | GWHASIU00000006 | 6 | CH_sbo_255 | 4 | 8 | 0.0000000197835 |
| Selenicereus undatus | Scaffold_33680 | 6 | CH_sun_59 | 4 | 6 | 0.00000000854254 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |