Functional clusters

Information

  • Type InterPro
  • Description Exocyst complex component Exo70

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group17 5 CH_ach_46 5 6 0.000000000108971
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 5 CH_arhy_62 11 21 1.17761e-24
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 5 CH_arhy_98 9 13 4.94474e-21
Brassica carinata ChrC03 5 CH_bca_124 6 7 0.000000000000380729
Brassica carinata ChrC05 5 CH_bca_1348 3 3 0.0000752169
Brassica carinata ChrB02 5 CH_bca_1636 3 4 0.000300659
Brassica carinata ChrB02 5 CH_bca_1990 3 5 0.000751128
Brassica carinata ChrB07 5 CH_bca_1991 3 5 0.000751128
Brassica carinata ChrC02 5 CH_bca_99 7 11 0.0000000000000156953
Brassica napus C04 5 CH_bna_340 5 10 0.00000000610335
Brassica napus A05 5 CH_bna_964 3 3 0.0000457685
Brassica oleracea C4 5 CH_bol_114 5 7 0.000000000172886
Brassica rapa A05 5 CH_bra_180 4 6 0.000000292526
Cicer arietinum L. Ca_LG2_v3 5 CH_car_3 9 18 1.8876e-19
Coffea canephora chr4 5 CH_ccan_182 4 49 0.000000150077
Cardamine hirsuta Chr3 5 CH_chi_207 4 4 0.0000000173885
Carya illinoinensis Chr13 5 CH_cil_507 3 3 0.0000188795
Cucumis sativus L. chr6 5 CH_csa_277 3 3 0.0000119162
Daucus carota DCARv2_Chr1 5 CH_dca_19 8 12 2.86725e-18
Davidia involucrata GWHABJS00000013 5 CH_din_26 9 9 8.20772e-22
Davidia involucrata GWHABJS00000014 5 CH_din_96 7 12 0.000000000000374849
Erigeron canadensis Conyza_canadensis_scaffold:2 5 CH_eca_483 3 4 0.0000244435
Eucalyptus grandis Chr10 5 CH_egr_418 5 6 0.00000000000818463
Erythranthe guttata scaffold_9 5 CH_egut_348 4 10 0.00000145119
Gossypium hirsutum A11 5 CH_ghi_769 3 3 0.0000347675
Glycine max Gm06 5 CH_gma_200 5 7 0.000000000622503
Glycine max Gm14 5 CH_gma_288 5 12 0.0000000233935
Glycine max Gm02 5 CH_gma_566 3 3 0.0000398142
Lupinus albus Lalb_Chr10 5 CH_lal_246 4 8 0.000000719481
Lotus japonicus Contig00141 5 CH_lja_155 4 5 0.0000000401026
Lonicera japonica GWHAAZE00000008 5 CH_lonja_11 21 35 3.32262e-47
Lonicera japonica GWHAAZE00000005 5 CH_lonja_1191 4 18 0.000660843
Lonicera japonica GWHAAZE00000005 5 CH_lonja_205 6 6 0.000000000000502613
Magnolia biondii Chr19 5 CH_mbi_140 6 9 0.000000000000685698
Magnolia biondii Chr07 5 CH_mbi_225 5 7 0.000000000243551
Magnolia biondii Chr14 5 CH_mbi_35 12 53 1.18918e-22
Malus domestica Chr17 5 CH_mdo_454 4 6 0.0000000881691
Manihot esculenta Chromosome10 5 CH_mes_485 3 4 0.0000581371
Medicago truncatula chr5 5 CH_mtr_2 26 37 2.20095e-67
Olea europaea chr10 5 CH_oeu_22 8 20 2.09096e-16
Oryza sativa ssp. japonica chr05 5 CH_osa_277 4 5 0.000000201784
Oryza sativa ssp. japonica chr07 5 CH_osa_601 3 4 0.000165219
Pisum sativum chr2LG1 5 CH_psa_39 8 19 1.83316e-17
Populus trichocarpa Chr17 5 CH_ptr_260 4 4 0.0000000118623
Phaseolus vulgaris Chr08 5 CH_pvu_46 12 54 5.93231e-21
Quercus lobata 1 5 CH_qlo_1144 4 13 0.000021649
Quercus lobata 4 5 CH_qlo_1308 4 16 0.0000549862
Quercus lobata 7 5 CH_qlo_401 6 9 0.00000000000191028
Quercus lobata 10 5 CH_qlo_476 7 29 0.000000000028923
Rhododendron simsii chr12 5 CH_rsi_545 3 3 0.00000605288
Simmondsia chinensis GWHAASQ00000010 5 CH_sci_208 4 15 0.00000457789
Solanum tuberosum ST4.03ch09 5 CH_stu_562 3 4 0.0000409487
Tarenaya hassleriana NW_010965775.1 5 CH_tha_166 3 3 0.0000129605
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_324 3 3 0.00000589355
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_325 3 3 0.00000589355
Actinidia chinensis Lachesis_group17 6 CH_ach_46 5 6 0.000000000108971
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 6 CH_arhy_62 11 21 1.17761e-24
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 6 CH_arhy_98 9 13 4.94474e-21
Brassica carinata ChrC03 6 CH_bca_124 6 7 0.000000000000380729
Brassica carinata ChrC05 6 CH_bca_1348 3 3 0.0000752169
Brassica carinata ChrB02 6 CH_bca_1636 3 4 0.000300659
Brassica carinata ChrB02 6 CH_bca_1990 3 5 0.000751128
Brassica carinata ChrB07 6 CH_bca_1991 3 5 0.000751128
Brassica carinata ChrC02 6 CH_bca_99 7 11 0.0000000000000156953
Brassica napus C04 6 CH_bna_340 5 10 0.00000000610335
Brassica napus A05 6 CH_bna_964 3 3 0.0000457685
Brassica oleracea C4 6 CH_bol_114 5 7 0.000000000172886
Brassica rapa A05 6 CH_bra_180 4 6 0.000000292526
Cicer arietinum L. Ca_LG2_v3 6 CH_car_3 9 18 1.8876e-19
Coffea canephora chr4 6 CH_ccan_182 4 49 0.000000150077
Cardamine hirsuta Chr3 6 CH_chi_207 4 4 0.0000000173885
Carya illinoinensis Chr13 6 CH_cil_507 3 3 0.0000188795
Cucumis sativus L. chr6 6 CH_csa_277 3 3 0.0000119162
Daucus carota DCARv2_Chr1 6 CH_dca_19 8 12 2.86725e-18
Davidia involucrata GWHABJS00000013 6 CH_din_26 9 9 8.20772e-22
Davidia involucrata GWHABJS00000014 6 CH_din_96 7 12 0.000000000000374849
Erigeron canadensis Conyza_canadensis_scaffold:2 6 CH_eca_483 3 4 0.0000244435
Eucalyptus grandis Chr10 6 CH_egr_418 5 6 0.00000000000818463
Erythranthe guttata scaffold_9 6 CH_egut_348 4 10 0.00000145119
Gossypium hirsutum A11 6 CH_ghi_769 3 3 0.0000347675
Glycine max Gm06 6 CH_gma_200 5 7 0.000000000622503
Glycine max Gm14 6 CH_gma_288 5 12 0.0000000233935
Glycine max Gm02 6 CH_gma_566 3 3 0.0000398142
Lupinus albus Lalb_Chr10 6 CH_lal_246 4 8 0.000000719481
Lotus japonicus Contig00141 6 CH_lja_155 4 5 0.0000000401026
Lonicera japonica GWHAAZE00000008 6 CH_lonja_11 21 35 3.32262e-47
Lonicera japonica GWHAAZE00000005 6 CH_lonja_1191 4 18 0.000660843
Lonicera japonica GWHAAZE00000005 6 CH_lonja_205 6 6 0.000000000000502613
Magnolia biondii Chr19 6 CH_mbi_140 6 9 0.000000000000685698
Magnolia biondii Chr07 6 CH_mbi_225 5 7 0.000000000243551
Magnolia biondii Chr14 6 CH_mbi_35 12 53 1.18918e-22
Malus domestica Chr17 6 CH_mdo_454 4 6 0.0000000881691
Manihot esculenta Chromosome10 6 CH_mes_485 3 4 0.0000581371
Medicago truncatula chr5 6 CH_mtr_2 26 37 2.20095e-67
Olea europaea chr10 6 CH_oeu_22 8 20 2.09096e-16
Oryza sativa ssp. japonica chr05 6 CH_osa_277 4 5 0.000000201784
Oryza sativa ssp. japonica chr07 6 CH_osa_601 3 4 0.000165219
Pisum sativum chr2LG1 6 CH_psa_39 8 19 1.83316e-17
Populus trichocarpa Chr17 6 CH_ptr_260 4 4 0.0000000118623
Phaseolus vulgaris Chr08 6 CH_pvu_46 12 54 5.93231e-21
Quercus lobata 1 6 CH_qlo_1144 4 13 0.000021649
Quercus lobata 4 6 CH_qlo_1308 4 16 0.0000549862
Quercus lobata 7 6 CH_qlo_401 6 9 0.00000000000191028
Quercus lobata 10 6 CH_qlo_476 7 29 0.000000000028923
Rhododendron simsii chr12 6 CH_rsi_545 3 3 0.00000605288
Simmondsia chinensis GWHAASQ00000010 6 CH_sci_208 4 15 0.00000457789
Solanum tuberosum ST4.03ch09 6 CH_stu_562 3 4 0.0000409487
Tarenaya hassleriana NW_010965775.1 6 CH_tha_166 3 3 0.0000129605
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_324 3 3 0.00000589355
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_325 3 3 0.00000589355

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001