Functional clusters
Information
- Type InterPro
- Description K Homology domain, type 1
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-7 | 5 | CH_aar_253 | 3 | 3 | 0.0000561229 |
| Acer truncatum | chr13 | 5 | CH_acertr_483 | 3 | 3 | 0.0000244226 |
| Brassica carinata | ChrB08 | 5 | CH_bca_1714 | 3 | 5 | 0.000374796 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 5 | CH_bvu_221 | 4 | 6 | 0.000000605555 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 5 | CH_eca_712 | 3 | 5 | 0.000372222 |
| Hydrangea macrophylla | Hma1.2p1_0482F.1 | 5 | CH_hma_71 | 4 | 4 | 0.00000000748597 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 5 | CH_lsa_656 | 3 | 3 | 0.000142634 |
| Magnolia biondii | Chr16 | 5 | CH_mbi_849 | 3 | 5 | 0.000143498 |
| Quercus lobata | 12 | 5 | CH_qlo_1322 | 3 | 3 | 0.0000691566 |
| Aethionema arabicum | LG-7 | 6 | CH_aar_253 | 3 | 3 | 0.0000561229 |
| Acer truncatum | chr13 | 6 | CH_acertr_483 | 3 | 3 | 0.0000244226 |
| Brassica carinata | ChrB08 | 6 | CH_bca_1714 | 3 | 5 | 0.000374796 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 6 | CH_bvu_221 | 4 | 6 | 0.000000605555 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 6 | CH_eca_712 | 3 | 5 | 0.000372222 |
| Fragaria x ananassa | Fvb6-4 | 6 | CH_fan_1281 | 3 | 5 | 0.000933923 |
| Hydrangea macrophylla | Hma1.2p1_0482F.1 | 6 | CH_hma_71 | 4 | 4 | 0.00000000748597 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 6 | CH_lsa_656 | 3 | 3 | 0.000142634 |
| Magnolia biondii | Chr16 | 6 | CH_mbi_849 | 3 | 5 | 0.000143498 |
| Quercus lobata | 12 | 6 | CH_qlo_1322 | 3 | 3 | 0.0000691566 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |