Functional clusters
Information
- Type InterPro
- Description NAF domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr4 | 5 | CH_camsi_594 | 4 | 8 | 0.000000553813 |
| Camellia sinensis var. sinensis | Chr8 | 5 | CH_camsi_825 | 3 | 3 | 0.0000128055 |
| Corylus avellana | 2 | 5 | CH_cav_373 | 3 | 3 | 0.0000071952 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 5 | CH_eca_500 | 3 | 4 | 0.0000353229 |
| Eucalyptus grandis | Chr01 | 5 | CH_egr_883 | 5 | 40 | 0.00000302193 |
| Eutrema salsugineum | scaffold_2 | 5 | CH_esa_548 | 3 | 7 | 0.000994377 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_300 | 4 | 4 | 0.0000000213334 |
| Medicago truncatula | chr2 | 5 | CH_mtr_1014 | 3 | 5 | 0.000092448 |
| Olea europaea | scaffold998 | 5 | CH_oeu_250 | 3 | 3 | 0.0000111126 |
| Papaver somniferum | NC_039360.1 | 5 | CH_pso_476 | 4 | 7 | 0.000000121474 |
| Papaver somniferum | NC_039362.1 | 5 | CH_pso_757 | 4 | 20 | 0.0000167403 |
| Quercus lobata | CM012294 | 5 | CH_qlo_1131 | 3 | 4 | 0.0000182263 |
| Quercus lobata | 5 | 5 | CH_qlo_1132 | 3 | 4 | 0.0000182263 |
| Simmondsia chinensis | GWHAASQ00000012 | 5 | CH_sci_332 | 3 | 4 | 0.000113005 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_1518 | 3 | 5 | 0.0000241933 |
| Solanum lycopersicum | SL4.0ch06 | 5 | CH_sly_327 | 4 | 6 | 0.000000215864 |
| Trochodendron aralioides | group1 | 5 | CH_tar_570 | 3 | 4 | 0.0000877497 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_164 | 5 | CH_tpr_720 | 3 | 8 | 0.000465278 |
| Camellia sinensis var. sinensis | Chr4 | 6 | CH_camsi_594 | 4 | 8 | 0.000000553813 |
| Camellia sinensis var. sinensis | Chr8 | 6 | CH_camsi_825 | 3 | 3 | 0.0000128055 |
| Corylus avellana | 2 | 6 | CH_cav_373 | 3 | 3 | 0.0000071952 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 6 | CH_eca_500 | 3 | 4 | 0.0000353229 |
| Eucalyptus grandis | Chr01 | 6 | CH_egr_883 | 5 | 40 | 0.00000302193 |
| Eutrema salsugineum | scaffold_2 | 6 | CH_esa_548 | 3 | 7 | 0.000994377 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_300 | 4 | 4 | 0.0000000213334 |
| Medicago truncatula | chr2 | 6 | CH_mtr_1014 | 3 | 5 | 0.000092448 |
| Olea europaea | scaffold998 | 6 | CH_oeu_250 | 3 | 3 | 0.0000111126 |
| Papaver somniferum | NC_039360.1 | 6 | CH_pso_476 | 4 | 7 | 0.000000121474 |
| Papaver somniferum | NC_039362.1 | 6 | CH_pso_757 | 4 | 20 | 0.0000167403 |
| Quercus lobata | CM012294 | 6 | CH_qlo_1131 | 3 | 4 | 0.0000182263 |
| Quercus lobata | 5 | 6 | CH_qlo_1132 | 3 | 4 | 0.0000182263 |
| Simmondsia chinensis | GWHAASQ00000012 | 6 | CH_sci_332 | 3 | 4 | 0.000113005 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_1518 | 3 | 5 | 0.0000241933 |
| Solanum lycopersicum | SL4.0ch06 | 6 | CH_sly_327 | 4 | 6 | 0.000000215864 |
| Trochodendron aralioides | group1 | 6 | CH_tar_570 | 3 | 4 | 0.0000877497 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_164 | 6 | CH_tpr_720 | 3 | 8 | 0.000465278 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |