Functional clusters
Information
- Type InterPro
- Description ATPase, AAA-type, core
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR06 | 5 | CH_aox_46 | 7 | 7 | 0.000000000000809725 |
| Camellia sinensis var. sinensis | Chr3 | 5 | CH_camsi_310 | 8 | 21 | 0.000000000696886 |
| Camellia sinensis var. sinensis | Chr10 | 5 | CH_camsi_417 | 6 | 9 | 0.0000000182107 |
| Capsicum annuum | PGAv.1.6.scaffold65 | 5 | CH_can_30 | 19 | 46 | 4.46547e-26 |
| Capsicum annuum | PGAv.1.6.scaffold1209 | 5 | CH_can_809 | 4 | 6 | 0.000551367 |
| Citrus clementina | scaffold_8 | 5 | CH_ccl_81 | 9 | 9 | 1.59876e-17 |
| Carpinus fangiana | Cfa08 | 5 | CH_cfa_335 | 4 | 4 | 0.00000698466 |
| Capsella rubella | scaffold_6 | 5 | CH_cru_366 | 4 | 4 | 0.0000103005 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 5 | CH_eca_386 | 4 | 4 | 0.00000307906 |
| Helianthus annuus | HanXRQChr13 | 5 | CH_han_428 | 6 | 11 | 0.0000000683511 |
| Helianthus annuus | HanXRQChr11 | 5 | CH_han_69 | 11 | 15 | 1.35081e-19 |
| Helianthus annuus | HanXRQChr07 | 5 | CH_han_697 | 4 | 4 | 0.0000107539 |
| Magnolia biondii | Chr07 | 5 | CH_mbi_584 | 4 | 4 | 0.00000333072 |
| Malus domestica | Chr17 | 5 | CH_mdo_695 | 4 | 4 | 0.00000646626 |
| Papaver somniferum | NC_039360.1 | 5 | CH_pso_681 | 5 | 11 | 0.00000452524 |
| Quercus lobata | 4 | 5 | CH_qlo_563 | 9 | 32 | 0.000000000776708 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_801 | 5 | 10 | 0.00000411635 |
| Salvia bowleyana | GWHASIU00000002 | 5 | CH_sbo_274 | 9 | 80 | 0.0000000496976 |
| Salvia bowleyana | GWHASIU00000006 | 5 | CH_sbo_602 | 4 | 8 | 0.000155743 |
| Sechium edule | LG14 | 5 | CH_sed_263 | 4 | 4 | 0.0000123748 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_133 | 17 | 23 | 2.32528e-24 |
| Sapria himalayana | scaffold5_19632047 | 5 | CH_shi_42 | 7 | 14 | 0.00000000000527266 |
| Aquilegia oxysepala | CHR06 | 6 | CH_aox_46 | 7 | 7 | 0.000000000000809725 |
| Camellia sinensis var. sinensis | Chr3 | 6 | CH_camsi_310 | 8 | 21 | 0.000000000696886 |
| Camellia sinensis var. sinensis | Chr10 | 6 | CH_camsi_417 | 6 | 9 | 0.0000000182107 |
| Capsicum annuum | PGAv.1.6.scaffold65 | 6 | CH_can_30 | 19 | 46 | 4.46547e-26 |
| Capsicum annuum | PGAv.1.6.scaffold1209 | 6 | CH_can_809 | 4 | 6 | 0.000551367 |
| Citrus clementina | scaffold_8 | 6 | CH_ccl_81 | 9 | 9 | 1.59876e-17 |
| Carpinus fangiana | Cfa08 | 6 | CH_cfa_335 | 4 | 4 | 0.00000698466 |
| Capsella rubella | scaffold_6 | 6 | CH_cru_366 | 4 | 4 | 0.0000103005 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 6 | CH_eca_386 | 4 | 4 | 0.00000307906 |
| Fragaria x ananassa | Fvb1-1 | 6 | CH_fan_864 | 4 | 5 | 0.000140676 |
| Helianthus annuus | HanXRQChr13 | 6 | CH_han_428 | 6 | 11 | 0.0000000683511 |
| Helianthus annuus | HanXRQChr11 | 6 | CH_han_69 | 11 | 15 | 1.35081e-19 |
| Helianthus annuus | HanXRQChr07 | 6 | CH_han_697 | 4 | 4 | 0.0000107539 |
| Magnolia biondii | Chr07 | 6 | CH_mbi_584 | 4 | 4 | 0.00000333072 |
| Malus domestica | Chr17 | 6 | CH_mdo_695 | 4 | 4 | 0.00000646626 |
| Papaver somniferum | NC_039360.1 | 6 | CH_pso_681 | 5 | 11 | 0.00000452524 |
| Quercus lobata | 4 | 6 | CH_qlo_563 | 9 | 32 | 0.000000000776708 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_801 | 5 | 10 | 0.00000411635 |
| Salvia bowleyana | GWHASIU00000002 | 6 | CH_sbo_274 | 9 | 80 | 0.0000000496976 |
| Salvia bowleyana | GWHASIU00000006 | 6 | CH_sbo_602 | 4 | 8 | 0.000155743 |
| Sechium edule | LG14 | 6 | CH_sed_263 | 4 | 4 | 0.0000123748 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_133 | 17 | 23 | 2.32528e-24 |
| Sapria himalayana | scaffold5_19632047 | 6 | CH_shi_42 | 7 | 14 | 0.00000000000527266 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |