Functional clusters

Information

  • Type InterPro
  • Description Transcription factor CBF/NF-Y/archaeal histone domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_8 5 CH_aly_248 4 6 0.000000306941
Arabidopsis thaliana Chr5 5 CH_ath_382 3 5 0.000031994
Brassica carinata ChrC01 5 CH_bca_1754 3 5 0.000425826
Corylus avellana 4 5 CH_cav_295 4 8 0.0000011941
Cardamine hirsuta Chr8 5 CH_chi_574 3 5 0.000186099
Daucus carota DCARv2_Chr2 5 CH_dca_40 7 10 0.00000000000000341487
Glycine max Gm13 5 CH_gma_592 3 3 0.0000702518
Magnolia biondii Chr17 5 CH_mbi_93 8 28 9.67229e-16
Solanum lycopersicum SL4.0ch03 5 CH_sly_486 6 63 0.0000107664
Solanum pennellii Spenn-ch03 5 CH_spe_68 11 62 0.0000000000000048685
Solanum tuberosum ST4.03ch03 5 CH_stu_528 3 3 0.0000214924
Arabidopsis lyrata scaffold_8 6 CH_aly_248 4 6 0.000000306941
Arabidopsis thaliana Chr5 6 CH_ath_382 3 5 0.000031994
Brassica carinata ChrC01 6 CH_bca_1754 3 5 0.000425826
Corylus avellana 4 6 CH_cav_295 4 8 0.0000011941
Cardamine hirsuta Chr8 6 CH_chi_574 3 5 0.000186099
Daucus carota DCARv2_Chr2 6 CH_dca_40 7 10 0.00000000000000341487
Glycine max Gm13 6 CH_gma_592 3 3 0.0000702518
Magnolia biondii Chr17 6 CH_mbi_93 8 28 9.67229e-16
Solanum lycopersicum SL4.0ch03 6 CH_sly_486 6 63 0.0000107664
Solanum pennellii Spenn-ch03 6 CH_spe_68 11 62 0.0000000000000048685
Solanum tuberosum ST4.03ch03 6 CH_stu_528 3 3 0.0000214924

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001