Functional clusters
Information
- Type InterPro
- Description NADH:ubiquinone oxidoreductase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_10 | 5 | CH_amhyb_124 | 4 | 57 | 0.000000705285 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.scaffold_22 | 5 | CH_arhy_523 | 3 | 3 | 0.000000221838 |
| Brassica carinata | ChrC05 | 5 | CH_bca_489 | 3 | 6 | 0.0000000548317 |
| Brassica napus | C06 | 5 | CH_bna_1356 | 2 | 2 | 0.000519726 |
| Brassica oleracea | C6 | 5 | CH_bol_621 | 3 | 7 | 0.0000992335 |
| Davidia involucrata | GWHABJS00000230 | 5 | CH_din_454 | 2 | 2 | 0.0000500125 |
| Erythranthe guttata | scaffold_4 | 5 | CH_egut_722 | 2 | 2 | 0.000728147 |
| Eutrema salsugineum | scaffold_2 | 5 | CH_esa_485 | 2 | 3 | 0.000685305 |
| Helianthus annuus | HanXRQChr08 | 5 | CH_han_567 | 3 | 3 | 0.0000018278 |
| Lupinus albus | Lalb_Chr00c24 | 5 | CH_lal_293 | 3 | 3 | 0.00000280957 |
| Lupinus albus | Lalb_Chr13 | 5 | CH_lal_348 | 3 | 4 | 0.0000112349 |
| Magnolia biondii | Chr10 | 5 | CH_mbi_988 | 2 | 4 | 0.000291382 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_396 | 3 | 19 | 0.0000673652 |
| Rosa chinensis | RcHm_v2.0_CP | 5 | CH_rch_581 | 3 | 3 | 0.000000133499 |
| Solanum lycopersicum | SL4.0ch01 | 5 | CH_sly_157 | 5 | 6 | 0.0000000000226924 |
| Solanum pennellii | Spenn-ch11 | 5 | CH_spe_544 | 2 | 2 | 0.000044479 |
| Trochodendron aralioides | group3 | 5 | CH_tar_614 | 2 | 3 | 0.000180104 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 5 | CH_tpr_597 | 2 | 2 | 0.000227092 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_10 | 6 | CH_amhyb_124 | 4 | 57 | 0.000000705285 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.scaffold_22 | 6 | CH_arhy_523 | 3 | 3 | 0.000000221838 |
| Brassica carinata | ChrC05 | 6 | CH_bca_489 | 3 | 6 | 0.0000000548317 |
| Brassica napus | C06 | 6 | CH_bna_1356 | 2 | 2 | 0.000519726 |
| Brassica oleracea | C6 | 6 | CH_bol_621 | 3 | 7 | 0.0000992335 |
| Davidia involucrata | GWHABJS00000230 | 6 | CH_din_454 | 2 | 2 | 0.0000500125 |
| Erythranthe guttata | scaffold_4 | 6 | CH_egut_722 | 2 | 2 | 0.000728147 |
| Eutrema salsugineum | scaffold_2 | 6 | CH_esa_485 | 2 | 3 | 0.000685305 |
| Fragaria x ananassa | Fvb6-2 | 6 | CH_fan_263 | 3 | 7 | 0.0000000179746 |
| Helianthus annuus | HanXRQChr08 | 6 | CH_han_567 | 3 | 3 | 0.0000018278 |
| Lupinus albus | Lalb_Chr00c24 | 6 | CH_lal_293 | 3 | 3 | 0.00000280957 |
| Lupinus albus | Lalb_Chr13 | 6 | CH_lal_348 | 3 | 4 | 0.0000112349 |
| Magnolia biondii | Chr10 | 6 | CH_mbi_988 | 2 | 4 | 0.000291382 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_396 | 3 | 19 | 0.0000673652 |
| Rosa chinensis | RcHm_v2.0_CP | 6 | CH_rch_581 | 3 | 3 | 0.000000133499 |
| Solanum lycopersicum | SL4.0ch01 | 6 | CH_sly_157 | 5 | 6 | 0.0000000000226924 |
| Solanum pennellii | Spenn-ch11 | 6 | CH_spe_544 | 2 | 2 | 0.000044479 |
| Trochodendron aralioides | group3 | 6 | CH_tar_614 | 2 | 3 | 0.000180104 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 6 | CH_tpr_597 | 2 | 2 | 0.000227092 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |