Functional clusters

Information

  • Type InterPro
  • Description Potassium transporter

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-9 5 CH_aar_57 7 13 0.0000000000000918387
Aethionema arabicum LG-7 5 CH_aar_65 8 30 0.000000000000296109
Acer truncatum chr11 5 CH_acertr_41 7 9 3.08793e-16
Actinidia chinensis Lachesis_group16 5 CH_ach_227 3 3 0.0000198963
Actinidia chinensis Lachesis_group12 5 CH_ach_228 3 3 0.0000198963
Actinidia chinensis Lachesis_group2 5 CH_ach_229 3 3 0.0000198963
Arabidopsis lyrata scaffold_9 5 CH_aly_373 3 4 0.0000118899
Aquilegia oxysepala CHR04 5 CH_aox_264 3 3 0.0000128321
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 5 CH_arhy_825 3 3 0.0000204091
Amborella trichopoda AmTr_v1.0_scaffold00034 5 CH_atr_542 3 5 0.000468696
Amborella trichopoda AmTr_v1.0_scaffold00057 5 CH_atr_68 6 7 0.000000000000451323
Brassica carinata ChrC06 5 CH_bca_1014 3 3 0.00000786879
Brassica napus C07 5 CH_bna_1055 3 5 0.0000951539
Brassica oleracea C7 5 CH_bol_557 3 6 0.0000567197
Camellia sinensis var. sinensis Chr1 5 CH_camsi_1380 3 5 0.000544657
Camellia sinensis var. sinensis Chr12 5 CH_camsi_197 6 8 0.00000000000156503
Camellia sinensis var. sinensis Chr5 5 CH_camsi_628 4 6 0.000000842892
Camellia sinensis var. sinensis Chr8 5 CH_camsi_970 3 3 0.0000545526
Camellia sinensis var. sinensis Chr15 5 CH_camsi_971 3 3 0.0000545526
Capsicum annuum PGAv.1.6.scaffold339 5 CH_can_408 3 3 0.00000372633
Corylus avellana 2 5 CH_cav_408 3 3 0.0000156161
Corylus avellana 2 5 CH_cav_77 6 8 0.000000000000168343
Coffea canephora chr2 5 CH_ccan_242 3 8 0.00000234599
Coffea canephora chr5 5 CH_ccan_243 4 82 0.00000241228
Coffea canephora chr11 5 CH_ccan_414 3 22 0.0000644855
Ceratophyllum demersum 4 5 CH_cde_75 4 6 0.0000000858512
Carpinus fangiana Cfa01 5 CH_cfa_336 3 3 0.0000070208
Carpinus fangiana Cfa02 5 CH_cfa_621 3 10 0.000839764
Cardamine hirsuta Chr7 5 CH_chi_378 3 3 0.00000584803
Carya illinoinensis Chr08 5 CH_cil_521 3 3 0.0000314428
Carya illinoinensis Chr08 5 CH_cil_522 3 3 0.0000314428
Carya illinoinensis Chr09 5 CH_cil_523 3 3 0.0000314428
Carya illinoinensis Chr05 5 CH_cil_618 3 4 0.00012568
Carica papaya supercontig_53 5 CH_cpa_427 3 5 0.000110496
Chlamydomonas reinhardtii chromosome_17 5 CH_cre_81 3 8 0.0000217124
Cucumis sativus L. chr7 5 CH_csa_290 3 4 0.0000190161
Davidia involucrata GWHABJS00000018 5 CH_din_194 4 5 0.00000000727113
Durio zibethinus NW_019167893.1 5 CH_dzi_355 3 4 0.0000296341
Eucalyptus grandis Chr08 5 CH_egr_623 4 4 0.0000000164842
Eucalyptus grandis Chr07 5 CH_egr_692 5 17 0.0000000770243
Eucalyptus grandis Chr08 5 CH_egr_988 3 3 0.0000208617
Fragaria vesca Fvb3 5 CH_fve_467 3 3 0.00000801688
Fragaria vesca Fvb6 5 CH_fve_468 3 3 0.00000801688
Gossypium hirsutum A01 5 CH_ghi_904 3 4 0.000118519
Lupinus albus Lalb_Chr02 5 CH_lal_374 3 3 0.0000348551
Lupinus albus Lalb_Chr02 5 CH_lal_375 3 3 0.0000348551
Lupinus albus Lalb_Chr05 5 CH_lal_51 6 6 0.000000000000024739
Lonicera japonica GWHAAZE00000001 5 CH_lonja_362 4 4 0.00000000815187
Magnolia biondii Chr19 5 CH_mbi_675 4 26 0.000019777
Malus domestica Chr11 5 CH_mdo_1276 3 6 0.000425539
Malus domestica Chr10 5 CH_mdo_379 4 4 0.0000000149517
Malus domestica Chr13 5 CH_mdo_493 4 6 0.000000224022
Malus domestica Chr16 5 CH_mdo_780 3 3 0.0000213118
Medicago truncatula chr5 5 CH_mtr_1232 3 8 0.000367995
Medicago truncatula chr2 5 CH_mtr_802 3 3 0.00000658367
Nelumbo nucifera chr1 5 CH_nnu_338 4 19 0.0000192995
Nelumbo nucifera chr4 5 CH_nnu_357 3 4 0.00003618
Nelumbo nucifera chr1 5 CH_nnu_358 3 4 0.00003618
Oryza sativa ssp. japonica chr03 5 CH_osa_620 3 6 0.000273695
Petunia axillaris Peaxi162Scf00067 5 CH_pax_324 3 4 0.00000846466
Prunus persica Pp04 5 CH_ppe_539 3 4 0.0000272328
Pisum sativum chr1LG6 5 CH_psa_338 3 3 0.00000628574
Phaseolus vulgaris Chr09 5 CH_pvu_368 3 3 0.0000124704
Quercus lobata 3 5 CH_qlo_1507 3 4 0.000170363
Quercus lobata 12 5 CH_qlo_53 13 20 7.42464e-31
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_243 5 5 0.000000000000498894
Salix brachista GWHAAZH00000010 5 CH_sbr_396 3 3 0.0000136995
Sechium edule LG09 5 CH_sed_260 3 3 0.0000117576
Sequoiadendron giganteum chr3 5 CH_sgi_1479 3 3 0.0000144529
Sequoiadendron giganteum chr9 5 CH_sgi_547 5 5 0.00000000000602024
Sequoiadendron giganteum chr5 5 CH_sgi_548 5 5 0.00000000000602024
Solanum lycopersicum SL4.0ch09 5 CH_sly_555 3 4 0.0000475179
Selenicereus undatus Scaffold_19641 5 CH_sun_124 3 3 0.00000538583
Trochodendron aralioides group11 5 CH_tar_568 3 4 0.0000877497
Trochodendron aralioides group6 5 CH_tar_569 3 4 0.0000877497
Trochodendron aralioides group2 5 CH_tar_930 3 7 0.000766342
Theobroma cacao Chromosome_1 5 CH_tca_431 3 3 0.00000656565
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_196 4 5 0.000000127809
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_550 3 5 0.000261758
Vigna mungo CM024069.1 5 CH_vmu_406 3 6 0.000166353
Vanilla planifolia CM028158.1 5 CH_vpl_150 4 5 0.000000190251
Vanilla planifolia CM028157.1 5 CH_vpl_476 3 4 0.000147127
Vitis vinifera chr7 5 CH_vvi_118 6 9 0.000000000000485082
Zea mays 1 5 CH_zma_143 4 4 0.0000000236247
Aethionema arabicum LG-9 6 CH_aar_57 7 13 0.0000000000000918387
Aethionema arabicum LG-7 6 CH_aar_65 8 30 0.000000000000296109
Acer truncatum chr11 6 CH_acertr_41 7 9 3.08793e-16
Actinidia chinensis Lachesis_group16 6 CH_ach_227 3 3 0.0000198963
Actinidia chinensis Lachesis_group12 6 CH_ach_228 3 3 0.0000198963
Actinidia chinensis Lachesis_group2 6 CH_ach_229 3 3 0.0000198963
Arabidopsis lyrata scaffold_9 6 CH_aly_373 3 4 0.0000118899
Aquilegia oxysepala CHR04 6 CH_aox_264 3 3 0.0000128321
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 6 CH_arhy_825 3 3 0.0000204091
Amborella trichopoda AmTr_v1.0_scaffold00034 6 CH_atr_542 3 5 0.000468696
Amborella trichopoda AmTr_v1.0_scaffold00057 6 CH_atr_68 6 7 0.000000000000451323
Brassica carinata ChrC06 6 CH_bca_1014 3 3 0.00000786879
Brassica napus C07 6 CH_bna_1055 3 5 0.0000951539
Brassica oleracea C7 6 CH_bol_557 3 6 0.0000567197
Camellia sinensis var. sinensis Chr1 6 CH_camsi_1380 3 5 0.000544657
Camellia sinensis var. sinensis Chr12 6 CH_camsi_197 6 8 0.00000000000156503
Camellia sinensis var. sinensis Chr5 6 CH_camsi_628 4 6 0.000000842892
Camellia sinensis var. sinensis Chr8 6 CH_camsi_970 3 3 0.0000545526
Camellia sinensis var. sinensis Chr15 6 CH_camsi_971 3 3 0.0000545526
Capsicum annuum PGAv.1.6.scaffold339 6 CH_can_408 3 3 0.00000372633
Corylus avellana 2 6 CH_cav_408 3 3 0.0000156161
Corylus avellana 2 6 CH_cav_77 6 8 0.000000000000168343
Coffea canephora chr2 6 CH_ccan_242 3 8 0.00000234599
Coffea canephora chr5 6 CH_ccan_243 4 82 0.00000241228
Coffea canephora chr11 6 CH_ccan_414 3 22 0.0000644855
Ceratophyllum demersum 4 6 CH_cde_75 4 6 0.0000000858512
Carpinus fangiana Cfa01 6 CH_cfa_336 3 3 0.0000070208
Carpinus fangiana Cfa02 6 CH_cfa_621 3 10 0.000839764
Cardamine hirsuta Chr7 6 CH_chi_378 3 3 0.00000584803
Carya illinoinensis Chr08 6 CH_cil_521 3 3 0.0000314428
Carya illinoinensis Chr08 6 CH_cil_522 3 3 0.0000314428
Carya illinoinensis Chr09 6 CH_cil_523 3 3 0.0000314428
Carya illinoinensis Chr05 6 CH_cil_618 3 4 0.00012568
Cucumis melo chr01 6 CH_cme_135 4 5 0.0000000172554
Carica papaya supercontig_53 6 CH_cpa_427 3 5 0.000110496
Chlamydomonas reinhardtii chromosome_17 6 CH_cre_81 3 8 0.0000217124
Cucumis sativus L. chr7 6 CH_csa_290 3 4 0.0000190161
Davidia involucrata GWHABJS00000018 6 CH_din_194 4 5 0.00000000727113
Durio zibethinus NW_019167893.1 6 CH_dzi_355 3 4 0.0000296341
Eucalyptus grandis Chr08 6 CH_egr_623 4 4 0.0000000164842
Eucalyptus grandis Chr07 6 CH_egr_692 5 17 0.0000000770243
Eucalyptus grandis Chr08 6 CH_egr_988 3 3 0.0000208617
Fragaria x ananassa Fvb6-2 6 CH_fan_641 4 11 0.0000120513
Fragaria vesca Fvb3 6 CH_fve_467 3 3 0.00000801688
Fragaria vesca Fvb6 6 CH_fve_468 3 3 0.00000801688
Gossypium hirsutum A01 6 CH_ghi_904 3 4 0.000118519
Lupinus albus Lalb_Chr02 6 CH_lal_374 3 3 0.0000348551
Lupinus albus Lalb_Chr02 6 CH_lal_375 3 3 0.0000348551
Lupinus albus Lalb_Chr05 6 CH_lal_51 6 6 0.000000000000024739
Lonicera japonica GWHAAZE00000001 6 CH_lonja_362 4 4 0.00000000815187
Magnolia biondii Chr19 6 CH_mbi_675 4 26 0.000019777
Malus domestica Chr11 6 CH_mdo_1276 3 6 0.000425539
Malus domestica Chr10 6 CH_mdo_379 4 4 0.0000000149517
Malus domestica Chr13 6 CH_mdo_493 4 6 0.000000224022
Malus domestica Chr16 6 CH_mdo_780 3 3 0.0000213118
Medicago truncatula chr5 6 CH_mtr_1232 3 8 0.000367995
Medicago truncatula chr2 6 CH_mtr_802 3 3 0.00000658367
Nelumbo nucifera chr1 6 CH_nnu_338 4 19 0.0000192995
Nelumbo nucifera chr4 6 CH_nnu_357 3 4 0.00003618
Nelumbo nucifera chr1 6 CH_nnu_358 3 4 0.00003618
Oryza sativa ssp. japonica chr03 6 CH_osa_620 3 6 0.000273695
Petunia axillaris Peaxi162Scf00067 6 CH_pax_324 3 4 0.00000846466
Prunus persica Pp04 6 CH_ppe_539 3 4 0.0000272328
Pisum sativum chr1LG6 6 CH_psa_338 3 3 0.00000628574
Phaseolus vulgaris Chr09 6 CH_pvu_368 3 3 0.0000124704
Quercus lobata 3 6 CH_qlo_1507 3 4 0.000170363
Quercus lobata 12 6 CH_qlo_53 13 20 7.42464e-31
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_243 5 5 0.000000000000498894
Salix brachista GWHAAZH00000010 6 CH_sbr_396 3 3 0.0000136995
Sechium edule LG09 6 CH_sed_260 3 3 0.0000117576
Sequoiadendron giganteum chr3 6 CH_sgi_1479 3 3 0.0000144529
Sequoiadendron giganteum chr9 6 CH_sgi_547 5 5 0.00000000000602024
Sequoiadendron giganteum chr5 6 CH_sgi_548 5 5 0.00000000000602024
Solanum lycopersicum SL4.0ch09 6 CH_sly_555 3 4 0.0000475179
Selenicereus undatus Scaffold_19641 6 CH_sun_124 3 3 0.00000538583
Trochodendron aralioides group11 6 CH_tar_568 3 4 0.0000877497
Trochodendron aralioides group6 6 CH_tar_569 3 4 0.0000877497
Trochodendron aralioides group2 6 CH_tar_930 3 7 0.000766342
Theobroma cacao Chromosome_1 6 CH_tca_431 3 3 0.00000656565
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_196 4 5 0.000000127809
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_550 3 5 0.000261758
Vigna mungo CM024069.1 6 CH_vmu_406 3 6 0.000166353
Vanilla planifolia CM028158.1 6 CH_vpl_150 4 5 0.000000190251
Vanilla planifolia CM028157.1 6 CH_vpl_476 3 4 0.000147127
Vitis vinifera chr7 6 CH_vvi_118 6 9 0.000000000000485082
Zea mays 1 6 CH_zma_143 4 4 0.0000000236247

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001