Functional clusters

Information

  • Type InterPro
  • Description TauD/TfdA-like domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr11 5 CH_acertr_78 4 4 0.00000000000105119
Amaranthus hybridus AmaHy_arrow1_Scaffold_1 5 CH_amhyb_357 2 4 0.000505008
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 5 CH_arhy_559 3 4 0.000000451706
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 5 CH_arhy_631 3 5 0.00000112917
Camellia sinensis var. sinensis Chr15 5 CH_camsi_312 4 12 0.000000000715707
Corylus avellana 7 5 CH_cav_634 2 2 0.000230008
Citrus clementina scaffold_7 5 CH_ccl_639 2 2 0.000246093
Davidia involucrata GWHABJS00000008 5 CH_din_210 3 3 0.0000000150079
Erigeron canadensis Conyza_canadensis_scaffold:2 5 CH_eca_21 7 8 1.69755e-21
Eucalyptus grandis Chr02 5 CH_egr_1177 2 2 0.000175582
Gossypium raimondii Chr10 5 CH_gra_503 2 2 0.000160832
Helianthus annuus HanXRQChr09 5 CH_han_141 5 5 0.0000000000000502278
Helianthus annuus HanXRQChr10 5 CH_han_932 3 10 0.000122136
Lactuca sativa Lsat_1_v8_lg_1 5 CH_lsa_296 4 6 0.0000000186897
Lactuca sativa Lsat_1_v8_lg_4 5 CH_lsa_35 10 31 3.43278e-23
Magnolia biondii Chr06 5 CH_mbi_254 4 10 0.00000000108218
Malus domestica Chr10 5 CH_mdo_1301 2 2 0.000568817
Malus domestica Chr13 5 CH_mdo_1302 2 2 0.000568817
Manihot esculenta Chromosome06 5 CH_mes_624 2 2 0.000366379
Populus trichocarpa Chr10 5 CH_ptr_612 2 2 0.0001734
Quercus lobata 1 5 CH_qlo_1696 2 2 0.000516289
Quercus lobata 5 5 CH_qlo_739 3 3 0.0000000399842
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_1232 2 2 0.000239192
Rhododendron simsii chr09 5 CH_rsi_926 2 3 0.000580745
Salix brachista GWHAAZH00000010 5 CH_sbr_235 3 3 0.0000000595633
Sequoiadendron giganteum chr10 5 CH_sgi_1925 3 5 0.0000924734
Selaginella moellendorffii scaffold_0 5 CH_smo_301 3 13 0.00044752
Trochodendron aralioides group10 5 CH_tar_256 3 3 0.000000108135
Trochodendron aralioides group14 5 CH_tar_950 2 2 0.000900549
Tripterygium wilfordii NC_052253.1 5 CH_twi_395 2 2 0.000167252
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_88 4 4 0.0000000000120374
Vanilla planifolia CM028150.1 5 CH_vpl_14 7 14 1.58298e-18
Vitis vinifera chr9 5 CH_vvi_598 2 2 0.000228189
Zea mays 3 5 CH_zma_538 2 4 0.000920285
Acer truncatum chr11 6 CH_acertr_78 4 4 0.00000000000105119
Amaranthus hybridus AmaHy_arrow1_Scaffold_1 6 CH_amhyb_357 2 4 0.000505008
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.18 6 CH_arhy_559 3 4 0.000000451706
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 6 CH_arhy_631 3 5 0.00000112917
Camellia sinensis var. sinensis Chr15 6 CH_camsi_312 4 12 0.000000000715707
Corylus avellana 7 6 CH_cav_634 2 2 0.000230008
Citrus clementina scaffold_7 6 CH_ccl_639 2 2 0.000246093
Davidia involucrata GWHABJS00000008 6 CH_din_210 3 3 0.0000000150079
Erigeron canadensis Conyza_canadensis_scaffold:2 6 CH_eca_21 7 8 1.69755e-21
Eucalyptus grandis Chr02 6 CH_egr_1177 2 2 0.000175582
Gossypium raimondii Chr10 6 CH_gra_503 2 2 0.000160832
Helianthus annuus HanXRQChr09 6 CH_han_141 5 5 0.0000000000000502278
Helianthus annuus HanXRQChr10 6 CH_han_932 3 10 0.000122136
Lactuca sativa Lsat_1_v8_lg_1 6 CH_lsa_296 4 6 0.0000000186897
Lactuca sativa Lsat_1_v8_lg_4 6 CH_lsa_35 10 31 3.43278e-23
Magnolia biondii Chr06 6 CH_mbi_254 4 10 0.00000000108218
Malus domestica Chr10 6 CH_mdo_1301 2 2 0.000568817
Malus domestica Chr13 6 CH_mdo_1302 2 2 0.000568817
Manihot esculenta Chromosome06 6 CH_mes_624 2 2 0.000366379
Populus trichocarpa Chr10 6 CH_ptr_612 2 2 0.0001734
Quercus lobata 1 6 CH_qlo_1696 2 2 0.000516289
Quercus lobata 5 6 CH_qlo_739 3 3 0.0000000399842
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_1232 2 2 0.000239192
Rhododendron simsii chr09 6 CH_rsi_926 2 3 0.000580745
Salix brachista GWHAAZH00000010 6 CH_sbr_235 3 3 0.0000000595633
Sequoiadendron giganteum chr10 6 CH_sgi_1925 3 5 0.0000924734
Selaginella moellendorffii scaffold_0 6 CH_smo_301 3 13 0.00044752
Trochodendron aralioides group10 6 CH_tar_256 3 3 0.000000108135
Trochodendron aralioides group14 6 CH_tar_950 2 2 0.000900549
Tripterygium wilfordii NC_052253.1 6 CH_twi_395 2 2 0.000167252
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_88 4 4 0.0000000000120374
Vanilla planifolia CM028150.1 6 CH_vpl_14 7 14 1.58298e-18
Vitis vinifera chr9 6 CH_vvi_598 2 2 0.000228189
Zea mays 3 6 CH_zma_538 2 4 0.000920285

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001