Functional clusters

Information

  • Type InterPro
  • Description Phosphatidylserine decarboxylase-related

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group23 5 CH_ach_596 2 2 0.000814819
Actinidia chinensis Lachesis_group6 5 CH_ach_597 2 2 0.000814819
Brassica napus C07 5 CH_bna_183 4 4 0.0000000000261888
Brassica oleracea C7 5 CH_bol_891 2 2 0.000915212
Corylus avellana 9 5 CH_cav_164 4 8 0.00000000141924
Chara braunii BFEA01000116 5 CH_cbr_231 2 3 0.000215773
Coffea canephora chr2 5 CH_ccan_565 2 10 0.000268306
Citrus clementina scaffold_5 5 CH_ccl_638 2 3 0.000246093
Ceratophyllum demersum 2 5 CH_cde_309 2 2 0.000236939
Davidia involucrata GWHABJS00000005 5 CH_din_546 2 2 0.000150038
Erythranthe guttata scaffold_2 5 CH_egut_587 2 2 0.000218444
Gossypium hirsutum A12 5 CH_ghi_1302 2 3 0.000801015
Lonicera japonica GWHAAZE00000002 5 CH_lonja_1043 2 2 0.000359324
Olea europaea chr16 5 CH_oeu_113 3 3 0.0000000170963
Salvia bowleyana GWHASIU00000003 5 CH_sbo_382 3 12 0.00000273157
Sequoiadendron giganteum chr7 5 CH_sgi_2252 2 2 0.000292291
Sequoiadendron giganteum chr10 5 CH_sgi_2253 2 2 0.000292291
Selenicereus undatus Scaffold_33680 5 CH_sun_268 2 2 0.000217992
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_585 2 2 0.000278772
Vitis vinifera chr12 5 CH_vvi_275 3 3 0.000000086787
Actinidia chinensis Lachesis_group23 6 CH_ach_596 2 2 0.000814819
Actinidia chinensis Lachesis_group6 6 CH_ach_597 2 2 0.000814819
Brassica napus C07 6 CH_bna_183 4 4 0.0000000000261888
Brassica oleracea C7 6 CH_bol_891 2 2 0.000915212
Corylus avellana 9 6 CH_cav_164 4 8 0.00000000141924
Chara braunii BFEA01000116 6 CH_cbr_231 2 3 0.000215773
Coffea canephora chr2 6 CH_ccan_565 2 10 0.000268306
Citrus clementina scaffold_5 6 CH_ccl_638 2 3 0.000246093
Ceratophyllum demersum 2 6 CH_cde_309 2 2 0.000236939
Davidia involucrata GWHABJS00000005 6 CH_din_546 2 2 0.000150038
Erythranthe guttata scaffold_2 6 CH_egut_587 2 2 0.000218444
Gossypium hirsutum A12 6 CH_ghi_1302 2 3 0.000801015
Lonicera japonica GWHAAZE00000002 6 CH_lonja_1043 2 2 0.000359324
Olea europaea chr16 6 CH_oeu_113 3 3 0.0000000170963
Salvia bowleyana GWHASIU00000003 6 CH_sbo_382 3 12 0.00000273157
Sequoiadendron giganteum chr7 6 CH_sgi_2252 2 2 0.000292291
Sequoiadendron giganteum chr10 6 CH_sgi_2253 2 2 0.000292291
Selenicereus undatus Scaffold_33680 6 CH_sun_268 2 2 0.000217992
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_585 2 2 0.000278772
Vitis vinifera chr12 6 CH_vvi_275 3 3 0.000000086787

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001